KEGG   Setaria viridis (green foxtail): 117854125
Entry
117854125         CDS       T07951                                 
Name
(RefSeq) DNA-directed RNA polymerases II and V subunit 8A
  KO
K03016  DNA-directed RNA polymerases I, II, and III subunit RPABC3
Organism
svs  Setaria viridis (green foxtail)
Pathway
svs03020  RNA polymerase
svs03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:svs00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    117854125
  09124 Replication and repair
   03420 Nucleotide excision repair
    117854125
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:svs03021]
    117854125
   03400 DNA repair and recombination proteins [BR:svs03400]
    117854125
Transcription machinery [BR:svs03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     117854125
  RNA polymerase III system
   RNA polymerase III
     117854125
  RNA polymerase I system
   RNA polymerase I
     117854125
DNA repair and recombination proteins [BR:svs03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      117854125
SSDB
Motif
Pfam: RNA_pol_Rpb8 RNA_pol_RpbG DTP-pb9_B-dom
Other DBs
NCBI-GeneID: 117854125
NCBI-ProteinID: XP_034592310
LinkDB
Position
4:36631599..36634293
AA seq 144 aa
MVEYLFDENFSVSRLDPDGKKFDKVTRVEAHNEQVYMQLDVATEIFPLRAGDKFNMVIAP
TLNLDGTPDTGYYTQAGRKTLADKFDYVMHGKLYKISDDSSTSSSTKVEIYASFGGLLLL
LRCDSSSAASFELDQRLFLLIRKL
NT seq 435 nt   +upstreamnt  +downstreamnt
atggtcgagtatctcttcgacgagaacttcagtgtgagcaggctcgatcctgatggcaag
aagttcgacaaagtcactcgcgtcgaagctcataacgagcaagtgtacatgcagctagat
gttgctactgagatctttcctctgcgtgctggcgacaaattcaacatggtgatagctcct
actctgaatctggatggaacaccagacactggctactacacacaggctggaaggaaaaca
cttgctgacaagtttgactatgtcatgcatggaaagctttacaagatctcagacgacagt
tccaccagttcatctactaaagtggagatctatgcatcttttggtggcctcctgctgctg
cttaggtgcgatagttccagtgcagctagcttcgagctggatcagaggctgtttcttctt
atcaggaagctgtaa

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