Setaria viridis (green foxtail): 117854166
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Entry
117854166 CDS
T07951
Name
(RefSeq) probable 1-deoxy-D-xylulose-5-phosphate synthase, chloroplastic isoform X1
KO
K01662
1-deoxy-D-xylulose-5-phosphate synthase [EC:
2.2.1.7
]
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs00730
Thiamine metabolism
svs00900
Terpenoid backbone biosynthesis
svs01100
Metabolic pathways
svs01110
Biosynthesis of secondary metabolites
Module
svs_M00096
C5 isoprenoid biosynthesis, non-mevalonate pathway
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
117854166
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
117854166
Enzymes [BR:
svs01000
]
2. Transferases
2.2 Transferring aldehyde or ketonic groups
2.2.1 Transketolases and transaldolases
2.2.1.7 1-deoxy-D-xylulose-5-phosphate synthase
117854166
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GFIT
Motif
Pfam:
DXP_synthase_N
Transket_pyr
Transketolase_C
Motif
Other DBs
NCBI-GeneID:
117854166
NCBI-ProteinID:
XP_034592357
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Position
4:complement(2108655..2113964)
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AA seq
721 aa
AA seq
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MDTAFLRSPLARNLVYDEFAVLHSTSYRFHPLRYLRCNPTDSRPCQTLSASPLRGVTQRV
AALPDVDDFFWEKDPTPILDTIDAPIHLKNLSSKELKQLADEVRSEISFIMSRKCQPCGP
GRSVVELTIAIHYVFNAPMDKILWDAGQHAYAHKILTGRRSLFHTIKQKNGLSGFTSRFE
SEYDPFGAGHGCNSLSAGLGMAVARDINGRKNRIVTVISNWTTMAGQVYEAMGHAGFLDS
NMVVILNDSCHSLLPKADDRPKMSVNAFSSALSKIQSSKGFRRFREAAKGLAKWFGKGMH
EFAAKVDEYARGMIGPHGATLFEELGLYYIGPIDGHNIDDLICVLKEVATLDSTGPVLVH
VITGTENDTGGNISSEITPNEEGPSNSSHDLLKFLETGLSRTYNDCFVEALTAEAENDKC
IVVVHGGMGMDRSLRLFQSSFPDRFFDLGIAEQHAVTFSAGLACGGLKPFCIIPSTFLQR
AYDQIVEDVDMQKIPVRFAITNAGLVGSEGPTNSGPFDITFMSCLPNMIVMSPSNEDELV
DMVATAAMVEDRPICIRYPRGAIVGTSGTLTYGNPLQIGKGEILVEGKEIAFLGYGEVVQ
RCLIARSLLSNFGIQATVANARFCKPLDIDLIRTLCQHHSFLITVEEGTVGGFGSHVSQF
ISLDGLLDGRIKWRPIVLPDRYIEHASLAEQLDLAGLTAHHIAATALTLLGRHRDALLLM
K
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atggacacggcgtttctgcgttctccgcttgctcgtaatctagtttatgacgagtttgct
gttcttcactccacaagctaccgtttccatcctctgcgatatttgagatgcaacccgaca
gactcaaggccctgccaaacactgtctgcttcacctttaaggggcgtgactcagcgagtg
gccgcgctacctgatgtcgatgattttttctgggagaaggatcctactccaatcctggac
acaattgatgcgcccattcatttgaaaaatctatctagtaaggagctcaagcagttagct
gatgaagttcgttccgaaatatctttcataatgtccagaaaatgccagccgtgtggtcct
ggtcgctcggttgtggagctgacaattgctatacattatgtgtttaatgccccaatggat
aagatactatgggatgctggtcagcatgcgtatgcacacaagattctcacaggaaggcgc
tctctctttcataccattaaacaaaaaaatggcctttctggtttcacatctcgttttgag
agcgagtatgatccctttggtgctggacatggatgcaatagtctttccgctggccttggg
atggcggttgcaagggatataaatgggagaaaaaatcgaatagtgacagttataagtaat
tggacaaccatggctggccaggtgtacgaggcaatgggtcatgctggtttcctcgattcc
aacatggtagttattctaaatgatagttgtcactccttgcttcctaaagctgatgaccgg
ccaaagatgtcagtcaatgccttttctagtgctctcagcaagattcaatccagcaaagga
tttaggaggtttagggaggctgcaaagggacttgccaaatggtttggcaaagggatgcat
gaatttgctgccaaagttgacgagtatgctcgtggtatgataggtcctcatggagcaact
ctttttgaagaacttggattatattatatcggtcctattgatgggcataacattgatgat
ctcatctgtgtattaaaggaagttgcaactctagattcaactggtccagtacttgtacat
gtaattactgggactgaaaacgacactggtggaaatattagcagtgaaataactccaaat
gaggaagggccttcaaactcaagccatgatcttcttaaatttttagaaactggactttct
aggacatacaatgactgctttgtagaagcattaaccgcagaagcagagaatgacaagtgc
attgtggtagttcatggtggcatgggaatggatcgatcactccgcttattccagtccagc
ttcccagacagattttttgacttgggcatcgctgagcaacatgctgttaccttttccgct
ggtttggcctgtggaggtttaaagcctttctgcataattccatccacatttcttcagcga
gcatatgatcagatagtagaagatgtggacatgcaaaagataccagttcgatttgctatc
acaaatgctggtctggtggggtctgagggcccaactaattcaggaccgtttgatattaca
ttcatgtcctgcttgccaaacatgattgtcatgtcaccatctaacgaggatgaacttgtt
gacatggtggcaacagctgcaatggttgaggacagacctatttgcatccggtatcctagg
ggtgccattgttgggactagtggcactttaacatatggaaatccacttcagattggtaaa
ggagagattcttgttgagggaaaagagatagcttttcttggctatggtgaggtggtccag
agatgcttgattgctcgctctcttttatccaactttggcattcaggcgacagttgcaaat
gcgagattttgcaaaccacttgacattgatctgatcagaacgctatgtcagcatcatagt
tttcttatcacagtggaagaaggaacagttggtgggtttggatcgcatgtctctcagttt
atttcactcgatggtctacttgatggccgaataaagtggcgacccattgtgctaccagac
aggtatatcgaacatgcttcacttgctgagcaactcgacttggctggcctaactgctcac
cacatagctgcaaccgcattgaccctcctaggtcgtcaccgagatgcacttttgttgatg
aagtag
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