Setaria viridis (green foxtail): 117854183
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Entry
117854183 CDS
T07951
Name
(RefSeq) autophagy-related protein 2 isoform X1
KO
K17906
autophagy-related protein 2
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
117854183
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
svs04131
]
117854183
03029 Mitochondrial biogenesis [BR:
svs03029
]
117854183
Membrane trafficking [BR:
svs04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
117854183
Mitochondrial biogenesis [BR:
svs03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
117854183
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG2_CAD
Motif
Other DBs
NCBI-GeneID:
117854183
NCBI-ProteinID:
XP_034592376
LinkDB
All DBs
Position
4:11804601..11815132
Genome browser
AA seq
1929 aa
AA seq
DB search
MGLFDGFRLDTLLKRVCKSLLKKRLGDLILGDLDLDQFDIQLGRGTVQLNDLALNADLIN
RKLSGSPIMLKEGSIKSLLVRFAASCEIVVEELELVLSPSVASEVVDVHNECSVSGCTSD
TQTSVKTQRYESDSNQCSTSVSRDVDEGVKRIANAVKWFLTRFNIKLKNVYVVFDPQTSL
DSRLPETNRSLVFRIKELEFGTHLGQFKLDNFLTFHEAVIELLKMDDVDALLQNDPVRGT
TDISACHSTTAVLTGPIGGFSGKLNLSIPWNKGCLNFEKIDADVSVDSLELRLQISSIRW
IMNVWDSLQRKPVDEQNSAHNAADISISSFRSTLCSPASSSLKSGSDSVIGTSECLAHST
FSQSRQEKIQDSFLTRAYVITDWMEPVASEDQGDPDSDCDESIDQFFECFEELRNSQSSL
GNSGIWDWTCSVFNAISFASTLASGSDQVPKEPVIEKTLRASVAEVSVLLLFSDDMDIDA
SSVPVSALDDMRNSEMFSSCLSSQHFEKSIVSPATASSLNMHHLEAKCQKIHLDLQTYPE
NVRFKASIAQVKLDEYYHAGNNNSDDSHLGNHFLNNNLRQGVQASLPQCLFAAGDPSVET
YELCGNNSCELIKVELLKTFGECTFHYDVSTKDQDGNLVSSTSMSICLAPLVLWVHFHTL
YMLLSFISKVESDLSHGEHKIHMHGDDNGSRLTTSTGVSSNGSLKVQISMSPARIILCFP
SEFQWDLSHPSVLDKFLVIDHTSCLNVAEAASHPQNEFLNEVHLGKPCTSIRLATGNFDI
YLVKPANDVLDGRVCSSSRQTFSTMKIFSVTGASCNDSGITLIRRKYPVTCPEMVSKAWS
LAKLHDQLITKKQNSKWAGISPSTAQDLEETGSSMRQELIKSSELLLHVKLSCVSVQVCK
KDCGLLNKLLDHVLDGISNEETSTSENCKDKSVPNDICIQTSVIFECSILEICTELDETV
EVGPLLQTELEGSWSSLKLKVSNFSLFSYSNVGRLNNASFLWVNHGEAELWGSVSVKDDK
VPGESKDFLIVVCKDSACRRGDGEGTNVLSIGTAGCSVTHIRNPKLKENYTSVGVRSGTI
VAPGGRMDWINAMCLLFSSGSDGTGKSDNSNTVNSSRSGEPYASSFFLELTDVAVSYEPH
FKYFTLTAEATDPKFFSCILAASSFKLHNKSSSASAATDFDIQLRDLGVLLSESSGSKNV
TCGYGVDYLRQAGYVKVAQNTFIEASLRIDSSFWKLEILDSQFDIATCRDTTYGLIRLGS
QLQQLYGPDMRDALDHLQSRWNSVQQANKQNIAADASDKSESSLENMTDSGDCQSDGLLD
DIIENAFYTEDYMANDFWESNCCHSVSSSETDDGFELNTATSHVLLRSSLVTSETNVTQI
PLRQDSCPDQIIDSYYMPELHQSSSAPCIEEHKCTSGGESEDGGWYNNVPLTIVENHVSK
KKSKKGEQILQQEVKASVCHLNTDDESCNLKGKILIHDIDVKWRLYAGNDWLLPQKDPTS
FACTDGRDRSSSLEFSLTGLSIQLDMYPDGDVSISKLSIAAQDLSLCDQSIHAPWKLVLG
CYNSKDYPRESCSSVFRFELESVRPEPHAPLEDYRLHLEILPLQLHLDQGQLNFLIKFFQ
NDLCNNDPHLQSEKEIFNVKSTSYGRNTVVDEALLPFFQKFDVKPLVLHINYIPRQFDPI
ALGKGNYAELLNILPWKGIDLKLKHVSAMGVYGWNSICDTVAAEWLEDISKNQVHKLLKG
LPPIRSLVAVSSGTKKLVSLPIKSYKKDRKLLKGMQRGAVAFIRSVSIEAVGLGVHLAAG
AHDMLVKTERALTAVPPPLASCEAKRTKHNIRANQPESAQQGIKQAYESLTDGFGKTASA
LISNPIKAYNRAGAGSALATAICGAPAAAVAPVSASARAFHCALVGLRNSLDPEHKKESM
CKYHGPSQL
NT seq
5790 nt
NT seq
+upstream
nt +downstream
nt
atggggctcttcgacgggttccgcctcgacacgctgctgaagcgcgtctgcaagtcgctg
ctgaagaagcggctcggggatctgatcctcggcgacctcgacctcgaccagttcgacatc
caactcggccgcggcacggtgcagctcaacgacctcgccctcaacgccgatttaataaac
cgcaagttgtcgggatctcctattatgctgaaagaaggatcgataaaatccctgctagtt
agatttgctgctagttgcgagattgttgtggaagaactggagcttgtcctttctccatct
gttgcaagtgaagttgtggatgtgcataatgaatgctctgtctctggttgtacaagtgac
acacagacatcagtcaagacccaaagatacgaatccgatagtaatcagtgttctacttct
gtatctcgagatgtggatgaaggtgtcaagagaattgccaatgccgtcaaatggtttctg
acaagatttaatatcaagttaaagaatgtatatgttgtatttgatcctcaaaccagtttg
gatagtaggctcccagaaactaatcgatctctggtttttcgaattaaagagctagaattt
ggaacccacctcggtcagtttaaactggacaactttttaactttccatgaggcggtcatt
gagttattgaagatggatgatgtcgatgcactgcttcaaaatgatccagttagaggaaca
actgacatttcagcatgccatagtactactgcagtcttgacaggtcccattggtggattc
tcagggaaactcaacttaagcattccatggaataaggggtgcttgaactttgagaaaatt
gatgcagatgtatccgttgattcattagagttacggttacaaataagcagtatccggtgg
atcatgaatgtatgggattctctccaaagaaagccagtagacgaacaaaattccgctcat
aatgctgcagatatctctattagctctttcaggtctaccttgtgttcacctgcatcaagc
tctttgaaatcaggttcagattctgtgataggcaccagcgaatgcttggcccatagcaca
ttttctcaaagcaggcaagagaaaattcaggattctttccttacaagggcatatgtaata
acagactggatggagcctgttgcctctgaggatcaaggcgaccctgattcagattgtgat
gaaagcattgatcaattctttgaatgttttgaggaattgaggaactcccaatctagtttg
ggaaacagtggtatatgggactggacttgttcagtattcaatgccataagttttgcatca
accttagcttctggatcagatcaagttcctaaagaaccagtgattgagaagaccctacga
gcctccgttgctgaggtatctgttcttcttttgttcagtgatgacatggatatcgacgct
tccagtgttcctgtcagtgcattggatgatatgagaaattctgaaatgttttcgagctgc
ctttcctctcagcattttgagaaatcaattgtatctcctgctactgcgtccagcttaaat
atgcatcatctcgaagccaagtgtcagaaaattcatcttgatctacagacctatccagaa
aatgttaggttcaaggcatcaatcgctcaagtgaagcttgatgaatactaccatgctgga
aacaacaattcagatgattcacaccttggtaaccacttcttgaataataacttgcggcaa
ggagttcaagcttccctccctcagtgcctgtttgctgctggagatccctcagttgaaacc
tatgaactttgtggcaacaattcatgtgaactgattaaagttgaattgctaaaaactttt
ggcgagtgcacattccattatgatgttagtaccaaagatcaagatggcaatttagtaagc
tcaacttctatgtcaatctgtttggctcctttggttttatgggtgcatttccatacacta
tacatgttattgagttttatcagtaaagttgagtctgatttgtcacatggagagcataaa
attcacatgcatggtgatgataatggaagcaggttgaccaccagcacaggtgtgtcctca
aatggaagtctaaaggttcagatatccatgtcacctgcaagaatcatcctttgctttcca
tctgagtttcagtgggatttaagccacccatctgtcctggataagttcctggtgatcgac
cacacgtcatgtctgaacgtcgcagaagctgcatctcatcctcaaaatgaatttcttaat
gaggttcatcttggcaagccatgtacctcaatccgtttggctacagggaacttcgacatc
tatttggttaaacctgccaatgatgtactggatggtagagtctgttcttcaagtaggcaa
actttctctacaatgaagattttttctgttactggagccagttgtaatgactctggaatc
acacttattaggagaaagtatcctgtaacttgccctgagatggtgagcaaagcatggagt
ttggcaaagcttcatgatcaattgattactaaaaaacagaacagcaaatgggctggcatt
tccccttctacagcacaagatcttgaggagacaggatctagcatgcgccaggagctcatt
aagagctctgagctcttacttcatgttaaactttcttgtgtctcagtacaagtttgtaaa
aaggattgcggactactaaataagttgctagatcatgtccttgatgggatatcaaatgaa
gaaacaagcacatctgaaaattgcaaggacaaatctgttccaaatgatatttgcatccaa
acatccgtcatttttgaatgcagcatcttggaaatttgcactgaattggatgaaacagtg
gaagttggtcctttgttacagacagaactagaaggatcctggagctcgcttaagttgaaa
gtttcaaatttttctcttttctcttattctaatgttggacgactcaacaatgccagtttt
ctttgggtgaatcatggtgaagctgagctttggggttctgttagtgttaaggatgataaa
gtccctggagaaagcaaagattttcttatagtggtttgcaaggactctgcttgcaggcgg
ggtgatggtgaaggtactaatgtgttgtctattggcactgctggctgttctgtgacccac
atcaggaacccaaagctaaaagagaactacacttctgttggtgttcgttctggtacaatt
gtggcacctggtggccgtatggattggatcaatgcgatgtgcctgctgttcagttcaggt
tcagatggaactggaaagtcagataatagtaacacagtaaatagttctcggtctggtgaa
ccatatgcatcatctttctttcttgagttgactgatgttgctgttagctatgaacctcac
ttcaaatatttcactctcactgccgaagcaacggacccaaagtttttctcgtgcatctta
gctgcgtcatcatttaaacttcataataaatcttcatcagcctctgcagccactgatttt
gatatccagttacgtgatcttggggttctcctttcagagtcatctggatcaaaaaatgtc
acttgtggttatggtgtagattaccttcgtcaagcaggttatgttaaggttgcccagaac
acattcatcgaagcttctctaagaatcgattcttccttttggaagcttgaaatattggat
tcccaatttgatattgctacttgtcgtgatacaacttatggtcttattcgtttaggctcc
caactccagcagctatatggtccagatatgcgggatgctttagatcatctacaatctagg
tggaatagtgtccaacaagcaaacaagcaaaatatagctgctgatgcatcagacaagtct
gagagcagtttggagaatatgacggattctggtgattgccagtcagatggactgcttgat
gatatcattgagaatgctttttacacagaggactacatggccaatgacttttgggagagc
aattgctgtcactcagttagtagcagtgaaacagatgatgggtttgaactgaacacggcc
acttctcatgttttgcttagatcatcattggttacttcggaaaccaatgttactcaaata
ccactgagacaagactcctgtcctgatcaaatcattgactcatattatatgcctgaactt
catcaatcgtcatcagctccatgtattgaagagcataagtgtacatctggcggggagagt
gaagatggtggatggtataacaatgttcccttgacaatagttgagaaccatgtttcgaaa
aagaaaagcaaaaaaggagagcaaatacttcaacaagaagtgaaggcatctgtttgccac
ttgaatactgatgatgaatcctgtaatcttaaaggaaagattcttattcacgatatagat
gtcaagtggcggctgtatgctggaaatgactggttattacctcagaaagatccaactagc
ttcgcatgcacagatggcagagataggagctcttctttggagttttccctgacagggctc
agtatccaacttgacatgtatccagatggagatgtttctatatctaagctatccattgct
gctcaggacttaagtctttgtgatcaaagtatccatgctccgtggaaactggttcttgga
tgttacaactcaaaggattacccaagagaatcttgctctagtgtattcaggtttgaactg
gagtctgtaaggcccgaaccgcatgctcctttggaagactacaggcttcatctggagatt
ttacctctacagttgcatcttgatcaagggcaacttaacttcctaataaagttctttcag
aatgatttgtgtaacaatgaccctcatttgcaaagcgaaaaagagattttcaatgtgaaa
agcacaagctatggaagaaatacggttgtggatgaggcattacttcctttctttcagaaa
tttgatgtaaagccgcttgttctgcacattaattatatacctcgtcagtttgaccccatt
gcactaggcaaaggaaattatgcagaacttctcaacattcttccgtggaagggaattgat
ttgaagcttaagcatgtttctgcaatgggtgtttatggatggaacagcatatgtgataca
gtagctgcagaatggttggaggacatttctaaaaaccaggttcacaaattgttaaaaggg
cttcctccaataagatcactagttgctgtgagttcagggactaagaagttggtatctttg
cccataaaaagctacaagaaggaccgtaagttgctcaagggaatgcaaagaggtgcagtt
gcttttataaggagtgtttccattgaagcggtagggcttggtgtccatttggctgcggga
gctcatgatatgcttgtgaagacagaacgggcccttacagctgttccaccacctttagct
tcatgtgaagcgaaacgaacaaaacacaacataagagctaaccaacctgaaagtgcgcaa
caagggataaaacaggcttatgaaagcttaactgatgggtttggaaagactgcctcggct
ttgattagcaatcctattaaagcttataatcgggctggtgctggatcagccctggctact
gcaatatgtggagcaccagctgctgcagtagctccagtatcggcatctgctcgtgctttc
cattgtgcgcttgttgggctaaggaacagccttgatcctgagcacaagaaagaatccatg
tgcaaataccacggaccttctcaattgtag
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integrated database retrieval system
