Setaria viridis (green foxtail): 117854253
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Entry
117854253 CDS
T07951
Name
(RefSeq) tRNA threonylcarbamoyladenosine dehydratase isoform X3
KO
K22132
tRNA threonylcarbamoyladenosine dehydratase
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
svs03016
]
117854253
Transfer RNA biogenesis [BR:
svs03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
117854253
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GFIT
Motif
Pfam:
ThiF
Sacchrp_dh_NADP
TrkA_N
UDPG_MGDP_dh_N
Motif
Other DBs
NCBI-GeneID:
117854253
NCBI-ProteinID:
XP_034592445
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Position
4:10215469..10219871
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AA seq
460 aa
AA seq
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MGERAKEWLLAAGAGAAVGALSAAAVMNLLSRSKRREGYVRQLLESNGVTAGAGNARSSR
HLGATGSSDLLSDEVVSEQLTRNTQFFGMDSQKKVTESYVVVIGLGGVGSHAASMLLRSG
VGRLLLVDFDQVSLSSLNRHAVATRDDVGTPKALCLKKHFSMIYPECQIDARVQLYDPSS
EAEILSGQPDFVLDCIDNIDTKVALLAACVRRGLKVLSAMGAGARADPTRIRVADLRESS
NDPLSRSVRYRLKKEHGIEGGIPVVFSLEKPKAKLLPFQASKEEETPSDYQIVPGFRVRI
IPVLGTIPAIFGQVMASYVVTQLAGLDFQTEPVVNLDLDHYCILHQRLIEHEELTYGTAE
QVLVDAEEIMYIVKELWRGRSARDQNQKDTGRKMWRSVNELMLVRWDKSKPAGASNLILL
KFSEADAHESTTLDHIKEEEPEFYSMVTRVLKRAEVEFGL
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgggggagcgggcgaaggaatggctcctcgccgctggcgccggcgccgccgtcggcgcg
ctgtcagccgccgcggtcatgaatcttctatcgagatccaagcggagagagggctacgtg
cggcaactgctggaatcgaatggcgtcacggctggtgcgggcaacgctcgatccagcagg
catctgggtgccactggtagctccgatcttctctcagatgaagtggtctctgaacagctt
acaaggaatacacaattttttggcatggactctcagaagaaagtgactgaatcctatgtt
gtagtcattggtcttggaggggttggcagtcatgcagcttctatgctcctgagatctggt
gtcggcaggttgctccttgtggattttgatcaggtctcactctcgtcactaaatcgacat
gctgtggcaaccagagatgatgttggtactccaaaagcattatgcctcaagaagcatttt
tcgatgatatacccagagtgccaaatagatgcaagagtgcaactgtatgatccatcatct
gaggcagagattctttctggacagcctgactttgttctcgattgcatagataacattgat
accaaggtggcgctccttgcagcctgcgtccgcagaggtttaaaggtgctttctgcaatg
ggggctggagctcgagctgaccccaccagaattcgtgttgcagatttgagagaatcaagc
aatgatcccctctctcgatcagtgaggtaccggcttaagaaggaacatggaattgaaggt
ggaataccagtggttttttcattggaaaagccaaaggcaaagctacttccctttcaagct
tcaaaagaagaggaaactccatcagattaccagattgtgccagggtttagggttcgcatt
atcccagtgctgggaaccatccctgcaatatttggtcaagttatggcgtcctatgtggtt
actcagcttgctggattagattttcaaactgagccagttgttaacctggatttggatcat
tactgtatacttcatcagcgtcttattgagcatgaggagctgacatatgggacagctgag
caagttctggtagatgctgaagagataatgtacatcgtcaaggaattgtggcgtggtcga
agcgctagagaccaaaatcagaaggacactgggcggaaaatgtggagatctgtcaatgag
ctaatgcttgtcagatgggacaaatcaaagcctgctggtgcgtcaaacttaatacttctc
aagttcagtgaggctgatgcgcatgaatccactacacttgatcatataaaagaagaggaa
cctgaattctactctatggtcacgcgtgtgctgaaacgggctgaagtggagtttggttta
tga
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