Setaria viridis (green foxtail): 117854417
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Entry
117854417 CDS
T07951
Name
(RefSeq) ABC transporter B family member 4 isoform X2
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
117854417
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
svs02000
]
117854417
04147 Exosome [BR:
svs04147
]
117854417
04090 CD molecules [BR:
svs04090
]
117854417
Enzymes [BR:
svs01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
117854417
Transporters [BR:
svs02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
117854417
Exosome [BR:
svs04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
117854417
CD molecules [BR:
svs04090
]
Proteins
117854417
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_29
AAA_22
AAA_16
RsgA_GTPase
AAA_21
DUF87
Zeta_toxin
AAA_24
AAA_30
AAA_15
AAA_23
AAA_7
DLIC
AAA_25
Motif
Other DBs
NCBI-GeneID:
117854417
NCBI-ProteinID:
XP_034592492
LinkDB
All DBs
Position
5:complement(33522452..33528049)
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AA seq
1268 aa
AA seq
DB search
MDATASGAAARGDDQNGFCRGGEEKKPDAAKKVSLLGMFRYADRLDVLLMVVGAVGAVAN
GMADPLVTVLFGDVINSFGESTTQSIVRSVNKVVLKFIYLGIGASVVSFLQVSCWTMAGE
RQSARIRSLYLNAVLRQDIAFFDTELTTGQAVSRMSSDTLVVQDALGEKAGKVLQLASSF
FGGFIIAFTRGWLLTLVMLSSLPLVAIAGAVSAQFLTKVSSKKLTSYGDAGDTVEQTIGA
IRTVVSFNGENKAVAMYKKFIKKAYRTDILEGLTNGFGMGSVLCIMFCSYGLAFWYGGQL
IVDKGYTGGKIITVLIAVLIGATSLGNATPSFSAIAEGQSAAYRLFETIERKPEIDSGDT
SGVVLEDMNGNVELKDVHFCYPSRPDQLILDGLSLQVASGTTMAIVGESGSGKSTVISLV
ERFYDPQAGEVLIDGINIKNIRLNWIREKIGLVSQEPVLFMTSIKDNIIYGKEDAKFEEI
KRAAELANAANFIDKLPNGYDTLVGQRGAQLSGGQKQRIAIARAILKDPKILLLDEATSA
LDVESERIVQEALNRIMVERTTLVVAHRLSTVRNVDCITVVRQGKIVEQGPHDALVKDPN
GAYSQLIRLQETHTDERRKLADSGVPDSGSKSTSLSLRRSMNKDSFGNSSRYSFKNTLGL
SVELYEDRITDGKKTEELSDAVVLKKAPIGRLFKLNMPEVPVLLLGSIAASVHGVILPLF
GIIMSGAIKSFYQTPDKVKKDSSFWALISVVMGVACLISIPAEYSLFAIAGGKLIERIRS
LSFQSIVHQEVAWFDQASNSSGALGTRLSVDALNVRRLVGDNLALIVQSIAALTTGFVIA
FAADWRLALVITCVIPLVGAQGYAQVKYLKGFSEDAKEMYENASQVATDAVGSIRTVASF
CAEKRVVATYDEKCGALRKQGIRSGIVGGLGYGFSFLIMYLAYGLCFYVGAQFIRQGKTT
FPDVFKVFFALLLATVGVSQGSALASDATKARDSAISIFSVLDRKSKIDSSSDDGMVLEN
VTGNIDFNNISFKYPSRPDVQIFSGFTLHIPSGKTVALVGESGSGKSTIIALLERFYDPD
SGGILLDGVEIKSLKVSWLRDQMGLVGQEPVLFNDTIRANITYGKHGEVTEEEVMAVAKA
ANAHEFISGLPQGYDTMVGEKGIQLSGGQKQRVAIARAIIKDPKILLLDEATSALDAESE
RIVQDALDRVMVSRTTIVVAHRLSTIKGADMIAVLKEGKIVEKGRHEALMRIKGGAYAAL
VELRSKSE
NT seq
3807 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgacggctagcggcgccgctgcccgcggcgacgatcagaatggattttgcaga
ggcggcgaggagaagaagcccgatgcggccaagaaggtgtcgctgctcggcatgttccgg
tacgccgaccgcctggacgtgctgctgatggtggtgggggcggtgggggccgtggctaac
ggcatggccgatcccctcgtgaccgtcctcttcggcgacgtcatcaactccttcggcgag
agcaccacgcagagcatcgtccgcagcgtcaacaaggttgttctgaagttcatatatttg
ggcatcggagcttcagttgtctccttccttcaggtgtcttgctggacgatggccggagaa
aggcagtcagcccgcatccgttctttataccttaatgcagtcctgagacaagatattgca
ttcttcgatacagagttgacaacaggccaagcagtttccaggatgtccagtgataccctc
gtggttcaggatgctcttggcgagaaggcaggaaaggttctacaactcgcatctagcttt
tttggtggttttataatagcattcacaagaggctggctcctcactcttgtcatgctatcg
tcactaccgctagttgctattgccggtgcagtttctgcacagtttctaaccaaggtttct
agcaagaaactgacatcttatggggatgctggggatactgttgaacagaccattggagct
atacgaacggtagtttccttcaatggagagaacaaagctgttgcaatgtacaaaaaattt
atcaagaaggcgtacaggactgatattctggaaggccttaccaatggttttggcatggga
tctgtcttatgcattatgttctgcagctatggcctagctttctggtatggcggacagcta
attgttgacaaaggctatactggagggaagattattacagtgttgattgctgtgttaatc
ggtgctacttctttaggtaatgcaacaccgtctttttctgccatcgcggagggtcaatct
gcagcatacagattgtttgaaaccattgaaaggaaaccagagatagattcaggtgatacc
agcggcgtggtcctagaagatatgaatggaaatgttgagctaaaagatgttcacttttgc
tacccttcaagacctgatcaattgatattagatggattatcattacaagtagccagtggg
acaacaatggccatagttggagagagtggaagtggcaagtcaactgttatcagcttagtt
gaacgattctatgatccacaagctggtgaagttttgatagacggcattaacatcaagaat
attaggcttaactggataagagagaagatcggtctggtcagccaagaaccggtgctcttc
atgacctccattaaagataacattatttacggtaaagaagatgcaaaatttgaagagatc
aagagagcagctgagcttgcaaatgcagcaaacttcatcgacaagttaccaaatggctat
gatacattggttgggcaacgtggtgcacagctttctggaggacagaagcaaagaattgca
attgcaagagccatccttaaagatccaaaaatacttttgcttgatgaagcaacaagtgca
ttggatgtggaatctgagcggatagttcaggaggcactgaataggataatggtggaaagg
accacacttgttgttgctcatcgtttaagcactgtaaggaatgttgactgcataacagtt
gttcgtcaagggaaaatagtcgaacaaggccctcatgatgcactggtgaaggatcccaat
ggggcctactcccagcttattaggctacaagagactcatactgatgaaaggcgtaaacta
gcagactctggggtgcctgattccggatcaaaaagcaccagtctgtcacttagacggtca
atgaataaagattcttttggcaatagcagcagatattccttcaagaacaccttaggattg
tcggttgaattatatgaagataggatcacagatggaaagaaaacagaagagctctccgat
gctgtggtgcttaagaaagcaccgatcggacgtctctttaagctaaacatgccagaagtg
ccagttcttctgttaggctctatagcagcatcagtacatggagtcattctcccattgttt
ggtataataatgtctggtgctataaaatcgttctatcagacaccagataaggtaaaaaag
gatagtagcttttgggcactgatatctgttgttatgggggttgcgtgtctaatttcaatc
ccagcagaatattctttattcgcgattgctggtggcaagcttatagagcgtatccggtct
ttgtcatttcaaagcattgtgcaccaggaagttgcttggtttgatcaagcctcgaattcc
agtggggcacttggtacaaggctctcggttgacgcattaaatgttcggcgcttggtagga
gataatttggcccttatagtgcagtccatagctgcattaacaactggatttgtcatagct
tttgctgcagactggaggcttgccctggtcatcacatgtgtgattcctttggtaggcgca
caaggctatgctcaagtaaagtacttgaaggggtttagcgaagatgctaaggagatgtat
gaaaatgcaagtcaagttgcaactgatgctgttggtagtatcagaactgtagcatctttc
tgtgctgagaaaagagtggtcgcaacatacgacgagaaatgtggagctctaaggaaacag
ggaattcgtagtggaatagttggagggcttggctatggcttctctttcttaattatgtat
ctcgcatatggtctttgcttctatgttggtgcgcagtttatacgtcagggaaaaactact
tttccagatgtttttaaggttttcttcgccttgctgttggcaactgttggggtttctcag
ggtagtgcactggcttctgatgcaacaaaggcaagggattcagctatttccatcttcagt
gttctggataggaagtcgaaaattgactcaagtagtgatgatgggatggtgctggagaat
gtcactggcaacattgatttcaacaatatcagttttaagtacccgtcacgccctgatgtc
cagatattcagtggcttcaccttgcacattccttccggaaagacagtagcacttgttgga
gagagcggaagtggcaagtccacaataattgctttactggagcgtttctatgatcctgat
tctggtggaatcttactagatggtgttgaaattaagagcctaaaagttagctggctaagg
gatcaaatgggactggtaggccaggagccagtgcttttcaatgacacaatccgtgccaac
ataacatacggtaagcacggtgaggtaacagaggaagaggttatggctgtggctaaggca
gccaatgcacatgagttcatatcaggcttgccacaaggatatgacaccatggtgggagag
aaaggaattcagttatctggtgggcagaaacaacgtgtagctattgcaagggccataata
aaggaccctaagatactactacttgatgaagcaaccagtgccctggatgccgaatccgag
cgcattgttcaagacgcattggatcgagtcatggtaagccgcaccaccattgtggtggca
caccgcctctccacgatcaaaggggctgacatgattgcagtcctcaaggagggcaagatt
gtagagaagggaaggcatgaagccctgatgcgcatcaaaggtggagcctacgctgcacta
gtagagctccgctcaaaatctgaatag
DBGET
integrated database retrieval system
