Setaria viridis (green foxtail): 117854472
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Entry
117854472 CDS
T07951
Name
(RefSeq) ABC transporter B family member 3 isoform X1
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
117854472
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
svs02000
]
117854472
04147 Exosome [BR:
svs04147
]
117854472
04090 CD molecules [BR:
svs04090
]
117854472
Enzymes [BR:
svs01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
117854472
Transporters [BR:
svs02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
117854472
Exosome [BR:
svs04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
117854472
CD molecules [BR:
svs04090
]
Proteins
117854472
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_16
AAA_29
AAA_22
DUF87
Zeta_toxin
DLIC
RsgA_GTPase
AAA_21
AAA_30
AAA_15
DEAD
Motif
Other DBs
NCBI-GeneID:
117854472
NCBI-ProteinID:
XP_034592563
LinkDB
All DBs
Position
5:23625359..23641383
Genome browser
AA seq
1291 aa
AA seq
DB search
MGGRRDRAEGTDGRERDGAAGDGGGGGAAGAGRESSKPPPPAEGRVPLHWLFAFADRMDT
LLMAVGALAAVANGMAQPLMTFILGDVIDAFGSAESSHDVLHRVEKVIMNFVYLGIAAGL
ASTLQVSCWTISGERQAARIRALYLKAILRQDIAFFDMEMTTGQVVERMAGDTFLIQDAI
GEKVGKSIQLLSTFIGGFIIAFVRGWLLALVMLSSIPPVAIAFATVSKLRTRLSSRMQAK
YADAGTVVEQTLGAVRMVVSFNGEKQSITTYNKFIRKAYESALQEGAVQGLGLGSIMTVL
FCSYGLAVWYGSRLIVERGYNGGMIISVIMAVMMGAMSLGQATPSVTAFAEGQGAAYRMF
KTIERKPDIDIYDTTGIILEDIKGDVELKDVYFSYPTRSEHLVFDGFSLQVPSGTTMALV
GESGSGKSTVISLVERFYDPKAGEVLIDGVDIRRMKLGWIRGKISLVSQEPVLFSTTIRE
NIAYGMENLTPDEIMRAIKLANAAKFVDKLPDGLDTMVGEHGTQLSGGQKQRIAIARAIV
KNPRILLLDEATSALDMESERVVQEALNRVMLERTTIIVAHRLSTVKNADVISVLQHGKM
VEQGSHVELMKIPEGAYSQLIHLQETRQEAESSSVNPDLLVTNGFGSRSINNKPRSQSIS
RRSTSKGSSFRNSGSNSFRAPLGLPDPMEFSEAPDVQETTDKITSAPRKAPIGRLFYLNK
PEAFALGLGSIIAAMHGVIFPIYGILISTAIKVFYEPPAELLKESRFWASMFVVLGVCVF
VLIPIEYFLFGLAGGKLVERVRSLTFQSVMRQEINWFDKPEHSSGSIGARLSTDALNVKQ
LVGDNLALNVQTLSTVISGFTIAMVANWKLALIITVVVPFVGFQAYAQMKFLGGLNRNAK
LKYEEASQVATDAVGGIRTVASFSAEKKVMDAYEKKCESPTKKGIREGVIGGLGFGFSFL
TFYFTYALCFYVGAKFVQQGTATFPEVFRVFFVLVLGASAISRASAFGVDSTKANDAAAS
VFEILDRKSKIDYSSEEGVIITSVRGDIDFQNVFFKYPLRPNVQIFKDLSMRIPSGKSVA
LVGESGSGKSTVIALLERFYDPDSGKILFDDVELQAFKVGWLRQQVGLVAQEPVLFNDTI
RANIAYGKQGEASEDEIVAAAEAANAHQFISALPDGYNTIAGERGIQLSGGQKQRIAIAR
AIIKDPKVLLLDEATSALDADSERVVQEALDQVMVGRTTVVVAHRLATIRGADIIAVLKN
GAVAEKGRHEELMRIKDGTYASLVELSSSSA
NT seq
3876 nt
NT seq
+upstream
nt +downstream
nt
atgggagggaggagggacagggctgaaggtaccgacggccgggagagggacggcgctgcc
ggcgatggaggaggaggaggggccgccggagcaggccgtgagagttcgaagccgccgccg
ccggccgaggggcgcgtgccgctgcactggctctttgcgttcgcggaccggatggacacc
ctgctcatggccgtgggcgccctcgccgcggtggccaacgggatggcgcagccgctcatg
accttcatcttgggcgatgtcatcgacgccttcggctccgccgagtcctcccacgacgtg
ctccacagggtcgaaaaggtgatcatgaactttgtctatcttggcatcgcagcagggctt
gcttcaacacttcaggtatcttgttggacaataagtggagaaagacaagcagcacgaatc
agagccttgtacctcaaggcgattctgagacaggatattgcattctttgacatggagatg
actaccgggcaagtggttgaaaggatggcaggagatacattcctcattcaagatgccatt
ggagaaaaggttggaaagtccatacaactcctttctacttttattggtggcttcattatt
gcatttgtgagaggatggctcttagcccttgttatgctctcaagcattcctccagttgcc
attgcttttgcgactgtatcaaagcttaggacaagactctcctcccgcatgcaagcaaaa
tatgctgatgctggaactgttgttgaacaaacacttggagccgttagaatggttgtttca
ttcaatggcgagaagcagtctataacaacatataacaagttcataagaaaagcatatgaa
tctgctctacaagaaggtgctgtacaaggacttggattgggttcaataatgacagtctta
ttttgcagttatggattggcagtttggtatggatctagattgatagttgagcgaggatac
aatggtggcatgattatttctgtcataatggctgtcatgatgggtgcaatgtccttgggt
caggcaacaccatcagtgacagcttttgcagaaggtcaaggagcagcatatagaatgttc
aagacaattgaacggaaaccagatatcgatatatatgacaccacaggtattatattggag
gacatcaagggtgatgttgaactgaaggatgtgtacttcagctatcctaccaggtctgaa
catttggtatttgatggattctcattgcaagtaccaagtggaacaactatggccctagtt
ggagagagcggcagtgggaagtcgactgtgatcagtttggtggagaggttctatgatcca
aaggctggagaagttctgattgatggtgttgacatcagaagaatgaagcttggatggata
agaggaaaaattagtctcgttagccaagaaccagtgttgttctcaactacaatcagggaa
aacattgcttatgggatggaaaatctaacacctgacgagatcatgagagcaatcaagctt
gcaaatgctgctaaatttgttgataagttgccagatggtcttgacacaatggttggggaa
catggaactcaactgtctggagggcaaaaacaaagaatagcaattgctagagcaatcgta
aagaaccctaggatattgttgcttgatgaagcaaccagcgcattggatatggaatctgag
agggtagttcaagaggcattgaatagggtaatgttagaaaggactacaattattgttgct
catcgcctaagcacagtgaagaatgctgatgtgatatccgtcctgcaacatgggaagatg
gtggaacaaggttcacatgtagaactgatgaagatacctgaaggtgcttactctcagctg
atacatctacaagagactcggcaagaagcagaatcttcaagtgttaacccagatttgtta
gtaacaaatggttttggttccagatctattaataacaaaccaagaagccaaagtatctcc
aggagatcaactagtaaaggctcctcttttaggaatagtggtagtaactctttccgtgct
ccgcttggcctacctgatccaatggaattcagtgaagctcctgatgtacaggagaccaca
gacaaaattactagtgctccaaggaaagctccaattggtagactcttctatctgaacaaa
ccagaagcttttgcacttggacttggttctataattgctgcgatgcatggagtcattttt
ccaatatatgggatattgatttcaactgcgataaaggtgttttatgagccaccagcagaa
ctactgaaggaatccaggttctgggcaagtatgtttgttgtcctaggcgtttgtgtgttt
gttctgattccaatagaatacttcctgtttggattagctggtgggaagcttgtggagcgc
gtacggtcactgacattccagagtgtaatgcgccaagagatcaactggtttgataaacct
gaacactcgagtggatcaattggtgcaaggctatcaactgatgctctgaatgttaagcaa
cttgttggggacaatttagcactgaatgtccagactctgtcaactgtcatatccggcttc
acaatagcaatggtggcaaactggaagttggcactgattatcactgtggtggttcctttt
gtgggtttccaagcctatgctcaaatgaagttccttggtggtctcaatagaaatgcaaag
ttgaagtatgaagaagcaagtcaagtagcaactgatgcagttggcggcatcagaactgtg
gcatcgttttctgccgagaagaaggtgatggatgcctatgagaagaaatgtgaatctcca
acaaagaaaggaataagagaaggtgttattggtggcttggggttcggattctcattcctc
accttctactttacatatgctctgtgcttctatgttggtgccaagtttgttcagcaagga
acggccacatttcctgaagtgtttagggtcttcttcgtattagttttaggagcaagtgca
atctcacgagcaagtgcttttggtgtggacagcaccaaggctaatgatgcggcagcatct
gtctttgaaattcttgaccgtaagtccaagatcgattacagcagcgaagagggtgtgatc
atcacaagtgtgaggggtgacattgatttccagaatgtgttcttcaagtatccgttacga
ccaaatgttcaaatcttcaaggatctatcaatgaggattccttctggaaagtctgtcgca
ctagttggggagagtgggagtgggaagtccacagtgatcgcgctactcgaaaggttctat
gatccggactccggtaagatcctcttcgacgatgtggaacttcaagccttcaaagttggc
tggcttcggcagcaagtggggctagttgcccaagagccagtactgttcaacgacaccatc
cgcgccaacatagcttatgggaagcaaggggaagcatctgaagatgaaatcgttgctgct
gctgaagctgccaacgcacatcagttcatctccgcgttgcctgacgggtacaacaccatc
gctggcgaaagagggatccaattgtcaggtgggcagaagcagcgtattgccattgcgagg
gccatcataaaggaccccaaggtgctgctgctggatgaggcaacaagcgcgctagatgcg
gactcggagcgagtggtgcaggaggcgctggaccaggtgatggtcggtaggacgaccgtg
gtggtagcacaccgtttagcgacgatcagaggtgcagatatcattgctgtactgaagaac
ggggccgtagccgagaaaggcaggcatgaagagttgatgcggataaaggacggaacctac
gcttcgcttgttgagcttagctctagttctgcatga
DBGET
integrated database retrieval system
