Setaria viridis (green foxtail): 117854478
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Entry
117854478 CDS
T07951
Name
(RefSeq) DNA repair protein XRCC2 homolog isoform X1
KO
K10879
DNA-repair protein XRCC2
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
117854478
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
svs03400
]
117854478
DNA repair and recombination proteins [BR:
svs03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecA family proteins
117854478
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rad51
AAA_25
Motif
Other DBs
NCBI-GeneID:
117854478
NCBI-ProteinID:
XP_034592573
LinkDB
All DBs
Position
5:41895079..41900476
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AA seq
339 aa
AA seq
DB search
MAREAGGDPRAWLAVDETAAAFISRSLASRPPIILPPPLHRAPLRPGNVVEIAGPSNSGK
SHLLLMAAVQCILPKEWEGIYFGGLGKSVMYLDLDCRFDVLRLAQILRNRIAEGFAHLRN
GGLEKDGTKDEFQCSFENTLFSDCMQHFLYVRCYNSSEFTAALKTVQSQSRSEVLGVGIY
FVMIDSIGAFYWIDRASQPVRESKGKSLQSVTETVVHEIRTFLQLQPALVLVTKAPIYAE
GTTTANDFNRGSSKYTLEDSTVLRYSRQEEERTLSYREYMPSIWQSFVTHRINLQVEEAE
VPSVQENGVHSTHTSEWVQPSLKTKEKFSIVDDGVILIQ
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atggccagagaggcgggaggagatcccagagcgtggttggccgtagacgagacggcggcg
gccttcatctcccgctccctcgcctcgcgccccccaatcatcctcccgccgccgctccac
cgtgcgccgctccgcccgggcaacgtcgtcgagattgccggcccgtccaactccggcaag
tctcaccttcttctcatggctgcagtgcagtgcatattgccaaaggaatgggagggcatc
tactttgggggcctggggaagtcagtcatgtacttggacctggactgccgatttgatgtg
ttgcggctggctcaaattctgaggaatcgaattgctgagggttttgcacatctgagaaat
ggaggccttgaaaaggatggcaccaaggacgaatttcagtgttcttttgaaaacacgctg
ttctctgattgcatgcagcatttcttgtatgtccgttgctacaacagttctgaatttaca
gctgctttgaagactgtacagtctcaatcaaggagtgaagttcttggtgtcggtatatat
tttgttatgatagacagcattggtgctttctactggatagatcgtgcttctcaacctgtc
cgagagagtaaagggaagtcactgcagagcgttactgaaactgttgtccacgagatacgc
acgtttttgcaacttcaacctgcattggtgttggtcacgaaggcacccatttatgcagaa
ggcactacaacagcaaatgacttcaataggggttcttcgaagtacacgctggaggattca
accgttttgagatattcaagacaggaggaagaaagaactctctcttatcgggaatatatg
ccatcaatatggcagtcctttgttacacacaggataaatctgcaagtagaagaagcagaa
gttccctctgtgcaggaaaatggggtgcattctacacatacttctgagtgggtgcaacct
tcccttaaaacaaaggagaagttttctattgtggatgatggtgttatccttatacagtga
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