Setaria viridis (green foxtail): 117854517
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Entry
117854517 CDS
T07951
Name
(RefSeq) ABC transporter B family member 4
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
117854517
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
svs02000
]
117854517
04147 Exosome [BR:
svs04147
]
117854517
04090 CD molecules [BR:
svs04090
]
117854517
Enzymes [BR:
svs01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
117854517
Transporters [BR:
svs02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
117854517
Exosome [BR:
svs04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
117854517
CD molecules [BR:
svs04090
]
Proteins
117854517
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
ABC_ATPase
SMC_N
AAA_22
AAA_29
AAA_16
AAA_21
AAA_15
RsgA_GTPase
Zeta_toxin
AAA_24
AAA_30
DUF87
AAA_7
AAA_25
YobI-ATPase
DLIC
Motif
Other DBs
NCBI-GeneID:
117854517
NCBI-ProteinID:
XP_034592629
LinkDB
All DBs
Position
5:33582281..33586778
Genome browser
AA seq
1154 aa
AA seq
DB search
MTGERQATRIRSLYLKSVLRQEIAFFDVEMTTGQVVSRMSGDTVLVQDAIGEKVGKFQQH
IATFIGGFVIAFIKGWLLSLVMLACIPPVVVAGGMVSKMLFKISSKGQTSYGEAGNVVEQ
TLGAIKTVVSFNGEKQAIAAYNKLIHKAYKAAVEEGITNGFGMGSVFCIFFSSYGLAIWY
GGKLILSKGYSGGDVINILLAIITGAMSLGNATPCLAAFAEGRSAAYRLFATIKRKPEID
PDDPSGKQLEGIKGDVDLKDVYFSYPARPDQLIFDGFSLHVSSGTTMAIVGESGSGKSTV
ISLLERFYDPQAGEVLIDGINIKSLRLDWIRGKIGLVNQEPLLFMTSIKDNISYGKEDAT
IEEIKRAAELANAANFIDKLPNGYDTMVGQRGAQLSGGQKQRIAIARAIIKDPRILLLDE
ATSALDVESERIVQEALNRIMVNRTTIVVAHRLSTVRNTDCISVVQQGKIVEQGPHDELI
MNPDGAYSQLIRLQESQEEEEQKLERCMSDKRSKSRSLSLKRSIGRGSAGNSSRHSSTVP
FGMPGSVELLEDNDTNGENQKEQADDSEAPKKAPMGRLAALNKPEVPILLLGALAAGVHG
VLFPMFGLLISNAIKTFYEPPDKLRKDSSFWGLMCVVLGIVSIISVPVEFFLFGVAGGKL
IERIRALSFRSIVHQEVAWFDDPKNSSGALGAKLSVDALNVRRLVGDNLALLAQVTSSLI
TGLVIAFVADWKLTLIILCAMPLSGAQGYAQVKFLKGFSQDAKMLYEDASQVATDAISSI
RTVASFCAEKRVMAIYDHKCEASKNQGVRTGMVGGLGFGFSFMMMYLTYGLCFYVGGQFV
RHNKSTFADVFMVFFALMMATIVISQTSALASDSTKAKDSSVSIFALLDRKSKVDSSSDE
GLILDEVKGDIDFRHVSFKYPSRPDVQIFSDFTLHIPSGKTVALVGESGSGKSTVISLLE
RFYNPDSGTISLDGVEIKSLKVDWLRDQIGLVGQEPVLFNDTIRANIAYGKHGEVTEEEL
LKVAKAANAHEFISSLPQGYDTTVGERGVQLSGGQKQRVAIARAILKDPKILLLDEATSA
LDAESERIVQDALDNVMVGRTTVIVAHRLSTIKSADIIAVLKDGVIVEKGRHETLMNIKD
GFYASLVELRSASS
NT seq
3465 nt
NT seq
+upstream
nt +downstream
nt
atgacaggagaaaggcaggcaacacgaattagatctctgtaccttaaatctgtcctgaga
caagaaatagcattctttgatgtagaaatgacaactgggcaagtagtttcaaggatgtct
ggtgataccgtgttggttcaggatgccattggtgagaaggtcggcaagttccaacaacat
attgctaccttcataggtggctttgtaatagcattcataaaaggatggcttttatctctt
gtcatgttggcatgcatacctccagttgttgtggctggaggaatggtctcaaaaatgctt
tttaaaatctctagcaaggggcaaacatcatacggtgaagcagggaatgtagtcgaacag
acgcttggggccattaaaacagttgtctccttcaacggtgagaagcaggctattgcagcg
tacaataaactcatacacaaggcatacaaggcagctgttgaggaaggaattaccaatggt
tttggcatggggtctgttttctgtatatttttctcaagctatggtttagccatatggtat
ggtggcaagttgattcttagcaaaggttactcaggaggagatgtcatcaatatcttgtta
gctataataactggggcaatgtcgttaggtaatgcaacaccctgcttggcagcctttgca
gaaggacgatctgcagcatacagattgttcgcaacaatcaagaggaaaccagaaattgac
cctgacgacccaagcggcaagcagttagaaggcatcaagggtgatgttgacctaaaggat
gtgtactttagctacccagcaagaccagatcaactaatatttgatggattctcattacat
gtgtctagcggcactacaatggctatagttggggagagtggaagtggcaagtcaactgtc
ataagtcttctagagagattctatgatccacaggctggtgaggttttaattgatggcatt
aacattaagagtttgcggcttgattggataagagggaagatcggtcttgttaaccaagaa
ccattgctctttatgacatctatcaaagataacatatcatatggcaaagaggatgcaaca
attgaagagatcaaaagagcagctgagcttgctaatgcagcaaatttcattgacaaattg
cccaacggctatgacacgatggttggccaacgtggcgctcagctctcagggggccaaaag
caaaggattgctattgcaagagcaataattaaagaccccagaattctgttgttagatgag
gcgactagtgcattggatgttgagtcagagaggattgttcaggaagcactgaataggatc
atggtgaatagaacaacaattgtggttgcacatcgtctgagtactgtgaggaataccgat
tgcatatcagttgttcaacaagggaaaatagttgagcaaggaccccatgatgaattgata
atgaaccctgatggtgcttattctcaacttattcgtctgcaagaaagccaagaagaagag
gaacagaaattagaacgttgcatgtctgataaaaggtctaaaagtagaagcctctcactg
aagcgatcgataggcagaggttctgcaggaaacagcagtcggcattcttcgacggtccca
tttggtatgcctggttcagttgagttgctcgaagacaatgatacaaacggggagaatcag
aaagagcaggctgatgatagtgaggccccaaagaaagctcctatgggacggcttgctgct
ctaaacaagccagaggtaccgattcttttgttaggagcactagctgctggagtgcatgga
gtgctttttccaatgtttgggctattgatctccaatgccatcaaaactttctatgagccg
cctgacaaactaagaaaggattcaagcttttggggtttgatgtgtgttgtgctgggtatt
gtatcgataatatcagtaccagtggagtttttcttgtttggtgtcgcaggggggaagctt
atcgagcgtattcgtgccttgtcatttcggagcattgtgcaccaagaagttgcttggttt
gatgatcccaaaaactccagtggagcacttggtgcaaagttgtcagttgatgctctgaat
gtccgaagattagtgggtgataacttggccttgttagctcaggtcacctcatcgctaatc
actggattggtcattgcttttgtggcagactggaagctcacattgatcatcctttgtgca
atgccactatcgggtgctcaaggatatgcacaagttaagtttttgaagggcttcagtcaa
gatgccaagatgctgtatgaagatgcaagtcaagtggccactgatgctatcagtagtatc
aggactgtagcttctttctgtgctgagaaaagagtcatggcaatctatgatcataaatgt
gaagcttcaaagaatcaaggggtcagaacaggaatggttggtggccttggttttggtttc
tcattcatgatgatgtaccttacatatggcctttgtttctatgttggagggcaattcgtg
cgtcataacaaatctacttttgcagacgttttcatggttttctttgcactgatgatggca
acaattgtcatatctcaaacaagtgcattggcttctgattctacaaaggcgaaggattca
tctgtctccatatttgctttattggaccgaaagtcgaaagttgactcaagcagtgacgaa
ggtttgatattagacgaggtcaagggtgacatcgacttcagacatgttagcttcaagtat
ccaagccgtccagatgttcaaatcttcagtgattttaccctacacataccctccgggaag
actgttgcacttgtgggagagagtggcagtggaaaatcaacagtaatttctttgctggaa
cgattctacaatcctgactctggtaccatctcactagatggggtagaaatcaagagccta
aaggtcgattggctaagggaccaaatagggctggtgggccaagagcctgtgctcttcaac
gacacaatccgcgccaacatagcatatgggaagcacggggaggtcactgaggaggagctc
ctgaaggtcgcaaaggcagccaatgcgcatgagttcatatcaagccttccccaggggtat
gacaccactgttggagagaggggggttcagctatctggtggccagaagcagcgggtggcc
atcgcaagggccatactaaaagatccaaagattcttcttcttgatgaggcaacgagcgcc
ttggatgctgagtctgagcgaattgtgcaagatgccttggacaatgtcatggttggcagg
accacagttattgtggcacaccgcctctcgacgatcaaaagtgctgatattattgcagtt
ctcaaggatggcgtgattgtggagaaaggaagacatgagacgctgatgaacatcaaagat
ggattctacgcttcgctagttgaacttcgttcagcttcgtcatag
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integrated database retrieval system
