Setaria viridis (green foxtail): 117854740
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Entry
117854740 CDS
T07951
Name
(RefSeq) beta-hexosaminidase 3
KO
K12373
hexosaminidase [EC:
3.2.1.52
]
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs00511
Other glycan degradation
svs00513
Various types of N-glycan biosynthesis
svs00520
Amino sugar and nucleotide sugar metabolism
svs00531
Glycosaminoglycan degradation
svs00600
Sphingolipid metabolism
svs00603
Glycosphingolipid biosynthesis - globo and isoglobo series
svs00604
Glycosphingolipid biosynthesis - ganglio series
svs01100
Metabolic pathways
svs04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
117854740
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
117854740
00513 Various types of N-glycan biosynthesis
117854740
00531 Glycosaminoglycan degradation
117854740
00603 Glycosphingolipid biosynthesis - globo and isoglobo series
117854740
00604 Glycosphingolipid biosynthesis - ganglio series
117854740
00511 Other glycan degradation
117854740
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
117854740
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
svs03110
]
117854740
Enzymes [BR:
svs01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.52 beta-N-acetylhexosaminidase
117854740
Chaperones and folding catalysts [BR:
svs03110
]
Intramolecular chaperones
Others
117854740
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_20
Glycohydro_20b2
Glyco_hydro_20b
Motif
Other DBs
NCBI-GeneID:
117854740
NCBI-ProteinID:
XP_034592858
LinkDB
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Position
5:complement(42746683..42752015)
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AA seq
527 aa
AA seq
DB search
MSHSAKMAPALGLLLAFLAIGSCIAADNIDLWPMPKTVSHGTQKLYVKKDITMSMVGSTY
SDEKSILKDAFQRMVDLITLNHVIDGINPSSLVLTCVNIVVHTPDDELNFGADESYNLTV
PTTGDPLYAQIEAQTVFGALHGLQTFGQLCYFDFTSRLIELNSAPWIITDTPRFPYRGLL
IDTARHYLPVKIIKGVIDAMTYSKLNVLHWHIVDEQSFPIEIPSYPKLWNGSYSYSERYT
MSDAIDIVRYAERRGVNVLAEIDVPGHARSWGVGYPSLWPSDSCREPLDVSKNFTFEVID
GILSDFSKVFKFKFAHLGGDEVNTSCWTTTPHIEGWLNNNHMNVSDAYRDFVLRSQKIAI
SHGYDIINWEETFNNFGDKLDRKTVVHNWLGEDVAPKVVAAGLRCIVSNQDKWYLDHLDA
SWEGFYMNEPLKGIDDTKQQQLVIGGEVCMWGEEIDASDIEQTIWPRAAAAAERLWTPTE
KLANDTRLVTSRLARFRCLLNQRGVAAAPLAGYGRASPAEPGPCVRQ
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atgagccactctgcaaagatggcaccggctctggggctgctccttgcatttctggcgatt
ggatcctgcatcgccgccgataacatcgacttgtggccgatgccgaagacggtgtcccat
ggaacacagaagctctacgtcaagaaagatatcacaatgtcaatggtgggaagcacgtac
tctgacgagaaatcaatcctgaaggacgccttccagaggatggttgatttgatcacactg
aaccatgtcatcgatggaataaacccaagttctttggttctcacctgtgttaatatagtt
gtccatacacctgacgatgagctcaactttggagcagatgagtcatataacttaactgtt
ccaacaacaggagatccactgtatgcacagattgaggctcaaaccgtttttggagcactt
catggcttacagacatttggtcagttgtgttactttgatttcacatcacgactcattgaa
ctcaactcagctccttggataattactgacacaccaagatttccttaccggggactgctt
attgatactgcaaggcactacctacctgttaagataatcaaaggagtgattgatgcaatg
acctacagtaaattgaatgttctccattggcacatcgtagacgagcaatcctttcccatt
gaaataccttcataccctaaactgtggaatggttcatactcttattcggagagatacaca
atgtctgatgcaattgacattgtacggtatgctgaaaggcgaggtgtaaatgtgttggct
gagattgatgttcctggccatgcccgttcatggggcgttggctacccatcattgtggcca
tcagatagctgcagagaaccactcgatgtcagtaaaaactttacatttgaagtcatcgat
ggcattctttcagattttagcaaggtttttaagttcaaatttgcccacttaggcggtgat
gaagtcaatacaagctgctggaccacaacaccacacattgaaggatggttgaataataac
catatgaacgtatcagatgcatacagagattttgtattaagatctcaaaagatagcaata
tcacatggctacgatatcattaactgggaagaaacgtttaacaactttggagacaaactg
gatcgtaaaaccgttgtgcataactggcttggagaagatgtagcaccaaaagtagttgct
gcagggctcagatgcatagtaagcaaccaggataagtggtacctggatcacttggatgcc
tcatgggaaggattttacatgaacgaacccttgaaaggtatcgatgacacaaaacagcaa
caattggtcattggaggtgaggtatgcatgtggggtgaggaaattgatgcatcagacatt
gaacaaacaatttggccacgtgctgcagcagctgcagagagactgtggactccgactgag
aagcttgcaaatgacacaagattagtcacatcaagattggcacgcttcaggtgtttgctg
aaccaaagaggagtagctgctgcaccactagctggttatggtcgtgcatcaccagcagaa
cctggtccctgtgtaaggcaatag
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