Setaria viridis (green foxtail): 117854778
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Entry
117854778 CDS
T07951
Name
(RefSeq) tyrosine--tRNA ligase 1, cytoplasmic
KO
K01866
tyrosyl-tRNA synthetase [EC:
6.1.1.1
]
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
117854778
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
svs01007
]
117854778
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
svs03016
]
117854778
03029 Mitochondrial biogenesis [BR:
svs03029
]
117854778
Enzymes [BR:
svs01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.1 tyrosine---tRNA ligase
117854778
Amino acid related enzymes [BR:
svs01007
]
Aminoacyl-tRNA synthetase
Class I (A)
117854778
Transfer RNA biogenesis [BR:
svs03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
117854778
Prokaryotic type
117854778
Mitochondrial biogenesis [BR:
svs03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
117854778
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1b
Motif
Other DBs
NCBI-GeneID:
117854778
NCBI-ProteinID:
XP_034592919
LinkDB
All DBs
Position
5:complement(42338560..42346920)
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AA seq
367 aa
AA seq
DB search
MEMRPDERFAVLRSIGEECIYEDGLCLMLKKKLDPICYVWFEPSPIMDIEQGILKTIYVN
KMVTAGCTVKILMADWFLQRHPRIGNDLNKIRAIGCYNIAMWEAAGMYLDKVDIKWLSDE
LNHRALDYWPLAMDVSRKYTMKRMASYSSYMAPYGPERLPAAEIIYPCMQVAAVLCQKAD
VWLFSMDQRNTIMLARDYCDDIFKENKPTILLHRVLPNLLEDPDFQDERDPGRTIFMLDE
EDDVNEKISSAFCPPRVAVYNPCLEYIKSVAFPWFGNLEVVQKEGNGSNKIFSSMEELIV
DYESGDLDSTDVKLALQKAINNILELVGEFFRSSTEAQALITAPKFQDQITADIRKIQMQ
NKEFASL
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atggagatgagacctgatgaaagatttgcagttctgaggagcattggggaggagtgcatt
tatgaggatgggctatgcctaatgctaaagaagaagctcgatcccatctgttatgtttgg
tttgagccatccccaattatggacatagagcagggtatattgaagacgatatatgtcaat
aaaatggttacagcaggttgtacagttaaaatactgatggcagattggtttctgcagcgg
caccctaggattggtaatgacctaaataaaatacgggccattggctgctataatattgcg
atgtgggaagcagctggcatgtacctagacaaagtagatatcaaatggttgtcagacgaa
ctgaatcatcgtgcgcttgattactggccacttgctatggatgtctcaagaaaatacacc
atgaagagaatggcaagttattcttcttatatggcaccatatgggccagaaaggctgcct
gctgctgagataatttacccctgtatgcaagttgctgctgttttatgccagaaggcagat
gtatggctattcagcatggatcagcgaaataccatcatgctagctagagattattgtgat
gacatatttaaggagaataaaccaactattttgctgcaccgtgtgctacctaatttacta
gaagatcctgacttccaggatgagagagatccaggacggaccatcttcatgttagatgag
gaggatgatgtaaatgaaaaaataagtagcgctttctgccctccgagagtagcagtatac
aacccatgtttggagtacataaagtctgttgccttcccatggtttggaaacttggaggtt
gttcagaaggaagggaatggtagtaacaagatattttcaagcatggaggaacttattgtt
gattacgaaagtggagatcttgattctactgatgttaagttggctctccaaaaagcaata
aacaacatattagagcttgtcggcgagttcttccgtagcagcactgaagctcaagctcta
attactgcccccaagtttcaggatcaaattactgcagacatacggaaaattcagatgcag
aacaaagagtttgccagtctttga
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