Setaria viridis (green foxtail): 117854813
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Entry
117854813 CDS
T07951
Name
(RefSeq) RHOMBOID-like protein 1
KO
K27605
rhomboid-like protein, plant [EC:
3.4.21.105
]
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
svs01002
]
117854813
Enzymes [BR:
svs01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.105 rhomboid protease
117854813
Peptidases and inhibitors [BR:
svs01002
]
Serine peptidases
Family S54: Rhomboid family
117854813
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Gene cluster
GFIT
Motif
Pfam:
Rhomboid
7TM_GPCR_Srv
DUF5345
Motif
Other DBs
NCBI-GeneID:
117854813
NCBI-ProteinID:
XP_034592958
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All DBs
Position
5:7980546..7984153
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AA seq
424 aa
AA seq
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MPRRGETAVVPIDVTSGGGGGTGGGGQERPKSERHRSHGPGHHGRHGPHHQHRSRPPPPP
PPAFRPFRRWFPFLVPLFIVANVVLFVLTMYVNDCPAHAQATGAAIGGSVGESATAQGCW
LVPELGRFAFQSFKENPLVGPSSATLLKMGALETSKVTKDHEGWRLITCIWLHAGVIHIL
ANMLSLVLIGIRLEKEFGFMRIGALYVISGVGGSLLSSLFMVSNISVGASGALFGLLGSM
LSELITNWTIYENKIAALLTLVMIIVINLAVGILPHVDNFAHLGGFTSGFCLGFVLLMRP
QFGYINQKNSPLGYPMGVTKRKFKIYQIILFVIATVILISGFTVGLVLLFQGFDASQHCS
WCHYLSCVPTSKWSCKTPNNSCMSSQLGNQLNLTCQSTGKTASYVLNNPNSQEAIRNLCV
HLCS
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgccgcggcggggcgagacggcggtggtccccattgacgtgaccagcggcggcggcggc
ggcaccggaggaggaggtcaggagcggcccaagagcgagcgccaccggagccacggcccg
ggccaccacggccgccacggcccgcaccaccagcaccggagccgcccgccgccgccgccg
ccgcccgcgttccgcccgttccggcggtggttcccgttcctcgtgccgctcttcatcgtc
gccaatgtcgtcctcttcgtcctcaccatgtacgtcaacgactgccccgcgcacgcccag
gccaccggcgccgcgatagggggatccgtcggcgagagcgccaccgcgcagggctgctgg
ctcgtgccggagctcggcaggttcgcgttccagtcgttcaaggagaaccccctcgtcggc
ccctcctccgccacgttgttgaaaatgggggcactggaaaccagtaaagttaccaaagat
catgaaggctggcgcctcattacgtgcatttggttgcatgctggagttatccacatactc
gctaatatgttgagtctcgtattgatcggaatcaggctcgagaaagaatttggtttcatg
aggattggtgcactgtatgtgatctctggtgttggtggcagcttgctgtcatctttattt
atggtgtcaaatatatctgttggcgcttcaggtgcactatttggactattgggctccatg
ctgtcagagctcataacaaattggactatatatgagaacaagatcgcagcactcttgact
cttgttatgatcattgtcatcaacttagctgttgggatccttccacatgttgacaacttc
gctcaccttggaggatttacatcagggttctgtcttggttttgtgttgctaatgcgaccg
cagtttggatatattaaccaaaagaattctcctcttggatatccgatgggcgtaactaaa
cggaagttcaagatatatcaaatcatactttttgttattgctacagtgatattaatttct
gggttcactgttggcttggtgttgctttttcaagggttcgatgctagtcaacactgttct
tggtgccattatttgagctgtgtgcctacttcaaagtggagctgcaaaacaccaaacaac
tcttgcatgtcttcacagcttggaaatcaattaaatctgacatgccaaagcactggaaag
actgcatcatatgttctgaacaatccaaacagccaagaagcaattagaaatctttgtgtt
cacctttgcagttaa
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