Setaria viridis (green foxtail): 117855180
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Entry
117855180 CDS
T07951
Name
(RefSeq) DNA polymerase eta
KO
K03509
DNA polymerase eta [EC:
2.7.7.7
]
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
117855180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
svs03400
]
117855180
Enzymes [BR:
svs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
117855180
DNA repair and recombination proteins [BR:
svs03400
]
Eukaryotic type
TLS (translesion DNA synthesis) factors
Y-family DNA polymerases
117855180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IMS
POLH-Rev1_HhH
IMS_C
IMS_HHH_1
IMS_HHH
UBM
Sec16
Motif
Other DBs
NCBI-GeneID:
117855180
NCBI-ProteinID:
XP_034593365
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All DBs
Position
5:36710772..36716053
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AA seq
635 aa
AA seq
DB search
MPVARPEPQEPRVIAHVDMDCFYVQVEQRRNPELRGQPTAVVQYNDWKGGGLIAVSYEAR
GFGVKRSMRGDEAKRVCPGINLVQVPVARGKADLNLYRSAGSEVVAILASKGKCERASID
EVYLDLTDAAKEMLLQAPPDSPEGIFMEAAKSNILGLPSSDASEKEKNVRAWLCRPDADY
EDKLLACGAIIVAQLRVRVLEETQFTCSAGIAHNKMLAKLVSGMHKPAQQTVVPSSSVQG
FLASLPVKKMKQLGGKLGSSLQDDLGVETIGDLLSFAEEKLQEQYGVNTGTWLWKIARGI
SGEEVEDRLLPKSHGCGKTFPGPKALKNSASVKSWLDQLCEELSERIQSDLNQNKRIAQT
LTLHARASKENERDSTKKFPSKSCPLRYGTGKIQEDAMKLFESGLHEFLESQNTGWSITS
LSVTASKIFDIPSGTSSILRYIKGPSSAASPAIPDSSSVPDDPSLDNNVHVTPIHEEQCE
PSISEKEDGKRYSSISAKQCPANEEKRIPKKLPEVKGTSSILKFLSRGQSALHEKRKSDV
LICSPQGPGSSSEANKPEEHNVSGQAADRSNINSGGEPSGSNPWLFNVEDIDPAVVEELP
LEIQREIQGWIRPSKEPSTKRRGSTISSYFPPARS
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atgccggtggcgaggccggagccgcaggaaccccgggtgatcgcccatgttgacatggac
tgcttctacgtccaagtggagcagcggaggaaccctgagctcaggggccagccgaccgcc
gtggtgcagtacaacgactggaaaggcgggggtttgatcgccgtcagctacgaggctcgc
gggtttggtgtgaagaggtccatgcgtggagatgaggccaagagggtttgtcctggtatt
aatctggttcaggtccctgtggcgcgtggcaaggccgaccttaatctttacagaagtgct
ggctctgaggttgttgcgatacttgcaagcaaagggaagtgcgagcgggcatccattgac
gaagtttatcttgaccttactgatgcagccaaggaaatgctcttacaagctcccccagat
tcaccggaggggatttttatggaagcagcaaagtcaaatatcttgggccttccttcttct
gatgccagcgagaaggaaaagaatgtgagggcatggctttgtcgaccggacgctgattac
gaggataagttattggcatgtggagctataattgttgcacagctacgagtcagagttctg
gaggaaacccaattcacatgctctgctgggattgctcacaataagatgttagcgaaactt
gtcagtggaatgcacaagcctgctcaacaaactgtagtcccttcttcatcagttcaaggc
tttctagcatcactacctgtgaagaagatgaaacagcttggtggtaagcttggaagttcc
ttgcaggatgatcttggggtcgagaccattggtgatcttctaagttttgcagaggaaaag
ttacaagagcagtatggagtaaatactggaacatggttatggaagattgctagaggcatt
agtggagaagaagttgaggatcgtcttctaccgaagagtcacggatgtggaaagacattt
cctggaccaaaagcactgaagaatagtgcttctgtcaaaagctggctggatcaactttgt
gaggaattaagtgaacgaattcagtctgacctgaaccagaacaagagaattgctcaaaca
ctaactcttcatgccagggcgtctaaggaaaatgaacgtgattcaacgaagaaattccct
tccaaatcctgtccattgcgctatgggactgggaaaattcaagaggatgcaatgaagcta
tttgaatctggccttcatgaatttttagaatctcagaacactggatggagcataacatct
ctttctgttactgcaagcaaaatatttgatataccaagtggaacaagctcaatcttgaga
tacattaaaggtcctagttctgctgcatctccagctatacctgattcttcatctgtacct
gatgatccttctcttgataacaatgtacatgtgacaccaattcatgaagaacagtgcgag
ccatctatctcagagaaagaagacggtaaaagatattcatcgatttcagccaaacaatgc
ccagcaaatgaagaaaaaagaatcccaaagaagttgcctgaagttaagggaacttcctcg
atattgaagtttctctcacggggtcaatctgccctccatgagaaaagaaaatctgatgta
ctaatttgcagtcctcaaggtccagggagttcttcggaagcaaacaaacctgaagaacac
aatgtgtctgggcaagctgcagataggagcaacatcaacagtggtggtgaaccctctggc
agtaacccctggttgttcaacgttgaagacatcgacccagcagtagtggaggagctgccg
ctggagatccagagagagatacaggggtggatccgtccatcgaaggagccgagcacgaag
agacggggttctaccatttcttcgtacttcccacccgcaaggtcttag
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