Setaria viridis (green foxtail): 117855380
Help
Entry
117855380 CDS
T07951
Name
(RefSeq) zinc finger protein MAGPIE
KO
K25870
zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
svs03000
]
117855380
Transcription factors [BR:
svs03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
117855380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-C2H2_4
zf-C2H2_jaz
zf-met
zf-C2H2_6
zf-C2H2_STOP2_C
Motif
Other DBs
NCBI-GeneID:
117855380
NCBI-ProteinID:
XP_034593614
LinkDB
All DBs
Position
5:complement(170724..173044)
Genome browser
AA seq
435 aa
AA seq
DB search
MLEKPPTMASEATAAIISNPLMAPLPLSHQQAEQQQQPLPPPAKKKRSLPGTPDPDAEVI
ALSPRTLMATNRFVCEICGKGFQRDQNLQLHRRGHNLPWKLRQRSGKEPPRKRVYVCPET
SCVHHNPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDWKAHAKTCGTREYRCD
CGTLFSRRDSFITHRAFCDALAEETARLNAAAAPSSYHFAAGSPPGLAAVRPNMVLPAPP
HLKLWGGSDTATLPSMGIIGGVLAGAGAPPPVVPPQLYAELLPVPGAPSSQQLDAAQLGW
LYGGSTGKQLSSSNASDLTTTEAPSVFSGQHHGNAKPAPPTDMSATALLQKAAQMGAVQA
SGNAMSAAEDVFRASSQLQHAANLTGGNVAYDILSAAGLNKDAAVHVGREETRDFLGVGV
QALCSSSLPLHGWIA
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgctggaaaagccacccacaatggcaagtgaagcaacggcagccatcatctccaacccc
ttgatggctcctcttcctctgtctcatcaacaagcagagcagcagcagcagcctctccct
cctccggccaagaagaagcgcagcctcccgggcacaccagaccctgatgcggaggtgatc
gctctgtcgccgcggacgctgatggcgacgaaccggttcgtgtgcgagatctgcggcaag
ggcttccagcgcgaccagaacctgcagctgcaccggcggggccacaacctgccatggaag
ctccggcagcgcagcggcaaggagcccccccggaagcgcgtgtacgtgtgcccggagacc
agctgcgtccaccacaacccgtcgcgcgccctcggcgacctcaccggaatcaagaagcac
ttctgccggaagcacggcgagaagaagtggaagtgcgacaagtgctcaaagaagtacgcc
gtgcagtcggactggaaggcgcacgccaagacatgcggaacacgagagtacagatgcgac
tgcggaaccctcttctccaggcgcgatagcttcatcacccaccgcgccttctgcgacgcg
ctggccgaggagacggccaggctcaacgccgccgccgcgcccagcagctaccacttcgcc
gcgggctcgccgccggggctggccgccgtgcgacccaacatggtgctccccgcgccgcca
cacctcaagctgtggggcggcagcgatactgctacgctgccatccatgggcattattggt
ggcgtcctagccggtgccggcgctccgccgccagtggtgcccccgcagctgtacgcggag
ctcctccccgtccccggtgcaccgtcgtcgcagcagctggacgcggcgcagctcggctgg
ctgtacggcgggagcaccggcaagcagctctcctcgtcaaacgccagcgacctgacgacg
acggaggcgccgtccgtgttcagcgggcagcaccacgggaatgccaagcccgcgccgccc
accgacatgtcggccacggcgctgctgcagaaggcggcgcagatgggtgccgtgcaggcg
tccggcaatgccatgtccgccgccgaggacgtgtttcgcgcaagcagccaactgcagcac
gctgccaacctcaccggcgggaacgtggcctacgacatcctgtcggcggccggcctcaat
aaggacgccgccgtgcacgtggggagggaggagacgagggatttcttaggcgttggcgtg
caagcgctgtgctcctcgtcgctgccgctgcatggctggattgcttga
DBGET
integrated database retrieval system