Setaria viridis (green foxtail): 117855584
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Entry
117855584 CDS
T07951
Name
(RefSeq) coatomer subunit beta-1
KO
K17301
coatomer subunit beta
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
svs04131
]
117855584
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
svs04147
]
117855584
Membrane trafficking [BR:
svs04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
117855584
Exosome [BR:
svs04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
117855584
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Coatomer_b_Cpla
Coatamer_beta_C
HEAT_2
Cnd1
Coatomer_g_Cpla
RAG2
Motif
Other DBs
NCBI-GeneID:
117855584
NCBI-ProteinID:
XP_034593857
LinkDB
All DBs
Position
5:complement(41963639..41969188)
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AA seq
952 aa
AA seq
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MEKPCTLLVHFDKGSPSMANEIKAELESGDGPAKADAMRRAISLLLNGESLPHLFITVVR
YVQSCDDHAVQKLLLLYLETVDKRDAATGKVLPEMILICQNLRNNLQSPNEYIRGVTLRF
LCRLTEPELLEPLVPSILSNLEHRHQFVRRHALSAVSAIYQRQHGDQLIPDAPELVERAL
ASEQDAAARRNAFLMLLASAQERAVAYLLTNADRVAEWPDLLQMAAVDLIRKVCRSKGRV
DKGRYIKIIISLLSAPSSAVVYECAGALVSLSSAPTAVRAAANTYCQLLSSQSDNNVKLI
ILDRLHELRTSHREVMVDVVMDVLRALGSPNVDVRKKVLDLVLDLLTPRNVEEVVLYLKK
EVVKTQGAEVEKGGEYRQMLVQAIHACAKKYPEVAASVVHLLMDFLGDPNVAAAFDVVLF
VREIIETNPKLRVSIIQRLIDTFSQIRASRVCICALWILAEYSLSLSEVESAISTVKQSL
GDLPFFTVSEEGESTDSSKPSQPVVNCVTVSSRRPAVLADGTYATQSAATETAISAPAAT
LGSLASSQNLRSLILSGDFFLAAAVACNLTKLVLRLEEVQPSKVEVNKACTGALLIMVSI
LELGQSSYLPHPIDNDSHDRIILCVRCLCNPGEDVRKVWLQSCRQSFVNMLAEKQFRETE
EMKAKAQISHAQPDDLIDFYHLKSRKGMSQLELEDAVQDDLMAATGQFTKDADDSNKLNR
ILQLTGFSDPVYAEAFVTVHHYDIVLDVTVINRTKETLQNLCLELATMGDLKLVDRPQNY
TLAPESSKQIRANIKVSSTETGVIFGNIVYETSNVMERSVVVLNDIHIDIMDYISPATCA
DVAFRNMWAEFEWENKVAVNTVIQDEKEFLNHIIKSTNMKCLTPPSALDGECGFLAANLY
AKSVFGEDALVNISIEKQADGKLSGYIRIRSKTQGIALSLGDKITLKQKGGS
NT seq
2859 nt
NT seq
+upstream
nt +downstream
nt
atggagaagccgtgcaccctcctggtgcactttgacaagggctcgccgtcgatggcgaac
gagatcaaggcggagctcgagtccggcgacgggcccgccaaggccgacgccatgcgccgc
gccatctcgctcctcctcaacggcgagtccctcccacacctcttcatcaccgtcgtccgc
tacgtacagtcctgcgacgaccacgccgtccagaagctcctcctcctctacctcgagacc
gtcgacaagcgcgacgccgccacggggaaggtcctccccgagatgatcctcatctgccag
aacctccgcaacaacctccagagccccaacgagtacatccgcggcgtcacactgcggttc
ctctgccgcctcaccgagcccgagctgctcgagccgctcgtcccctccatcctctccaac
ctcgagcaccgccaccaattcgtacgtcgccacgcgctatccgcggtctcggccatctac
caacgccagcacggggaccagctcatccccgacgcaccagagctcgtcgagcgcgcgctc
gcttccgagcaggacgccgcagcgcgcaggaacgcgttcctcatgctcctggcgagcgcg
caggaacgcgccgtggcgtacctcctcaccaacgccgatcgcgttgcggaatggccggat
ctgctgcagatggccgctgtcgacctcatccgcaaggtctgccgctccaagggccgcgtc
gacaagggcaggtatatcaagatcatcatctccctcctctcagcgcccagttccgccgtc
gtgtacgagtgcgcgggggcgctcgtgtccctctcttccgcgcccaccgctgtgcgcgca
gccgccaacacatactgccagctgctctcctcgcagagcgacaacaatgtgaagctcatc
atcctggaccgtctgcatgagctgcgaacatcgcatagggaggtgatggtggatgtggtc
atggatgtgttgcgtgcactggggagccccaatgtggatgtcaggaagaaggtgcttgat
ctagtgctggatctgctcactccgcgaaatgtggaggaggtggtgctctacctcaagaag
gaggtggttaagacgcagggtgctgaggtggagaagggtggggaataccgccagatgctg
gtacaggccattcatgcctgtgccaagaagtacccggaggtggctgcatcagttgtgcac
ctgctcatggacttccttggggaccctaatgttgctgcagcatttgatgttgttctgttt
gtgcgtgagatcatagagaccaatcccaagctccgtgtgtccattatccagaggttaatt
gacacattctctcagatccgagcatcccgtgtctgcatctgtgctctctggatccttgca
gagtactccctttcgttgtctgaagttgagagcgcaatttccactgtcaagcaaagcctt
ggggatctcccgttcttcactgtctctgaggaaggggagtcaactgattcctccaagcca
tcccagcctgtggtgaactgtgtcactgtgtcctcgaggaggcctgctgttcttgcggat
ggcacttatgccacacagagtgctgccactgagaccgctatttcagctccggcagcgact
ctcgggtcattggcttccagtcagaatctcagatctctcattctgtctggtgatttcttc
ttggctgctgctgttgcctgcaatctgaccaagcttgtgttgaggctggaggaggttcag
ccatcaaaggttgaagtaaacaaggcttgtactggagccttgttgatcatggtgtccatt
ctggaattgggacagtcatcttacctcccacaccctattgacaatgactcacatgatagg
attattctctgtgtgaggtgtctttgcaatcctggtgaagatgttaggaaggtttggttg
cagtcatgccgccagagctttgtaaacatgcttgctgagaagcaatttagggagactgag
gagatgaaggctaaggcacagatatctcatgcccaaccagatgatcttattgatttctac
cacctaaagagcaggaagggaatgagccaacttgagttggaagatgcagttcaagatgat
ttgatggccgcaactggtcaatttaccaaggatgcagatgattccaacaaattgaaccgg
attcttcaactgacaggattcagtgatcctgtgtatgctgaagcatttgtaactgttcat
cattatgatattgtacttgatgttacagtcataaaccgaacaaaagaaacactccagaac
ttgtgcttggagttagcaacaatgggcgacctaaaacttgttgaccgccctcaaaactac
acattggctccagagtcaagcaagcaaattcgagcgaatatcaaggtttcatcaacagag
actggagtcatatttggtaacatagtttatgaaacttcaaatgtgatggaacgatcagtg
gtggtcctaaatgatattcacattgatatcatggactacatctcacctgctacatgcgct
gatgttgctttccggaatatgtgggcagaatttgagtgggaaaataaggtggcagtgaat
actgtgattcaggatgagaaggagttcttaaatcatattattaagtcaacaaacatgaag
tgtctaacaccaccatctgcacttgatggagaatgtgggttcctcgctgcaaacctttat
gccaagagtgtgtttggtgaggacgctctggtgaacatcagcattgagaagcaggctgat
ggcaagttgagcggctacattagaataaggagcaagacccaaggaatcgcgctcagctta
ggagacaagattaccctaaaacaaaagggtggcagctag
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