Setaria viridis (green foxtail): 117855601
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Entry
117855601 CDS
T07951
Name
(RefSeq) probable transcription factor GLK2 isoform X1
KO
K28172
GARP family transcription factor, GLK subfamily
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
svs03000
]
117855601
Transcription factors [BR:
svs03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
117855601
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Motif
Other DBs
NCBI-GeneID:
117855601
NCBI-ProteinID:
XP_034593871
LinkDB
All DBs
Position
5:234824..239301
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AA seq
463 aa
AA seq
DB search
MLEVSSLRSPSKAADQRGFVGDHVGFPTSAGTDDFMVDDNLLDYIDFSSCCDMPFFDADG
DILPDLEVDPTESLLAEFSSPETSPAAADGGGGAEAKPPDEKQEQVAAKTAAAEETKADD
DEKTAAGGVVVTRKRNGDEVTTTEEDSAGAGAGSDTKSSAAAGGHSKKKASAGKDSNGKR
KVKVDWTPELHRRFVQAVEQLGIDKAVPSRILEIMGIEGLTRHNIASHLQKYRSHRKHLM
AREAEAATWAQKRQLYAAAPVARKVEAAAAAGPPWVVPTIGFPPPPPPAMAPPPPPFCRP
LHVWGHPPTAAVEAPATMLPVWPRHLAPPRPWVDPGYWHQQYNAGRTKWAPPQAAVTQGT
PCVPPPPAMVQLPRFPHPMYSRPPVMVPPPPPPPTTTTTKLAELQLQLDAHPSKESIDAA
IGDVLVKPWLPLPLGLKPPSLDSVMSELHKQGIPKIPPASSTG
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgcttgaggtgtcgagccttcggagccctagcaaggcggcggatcagcgcgggttcgtc
ggcgaccatgtcgggttcccgacgtccgccggcaccgacgacttcatggtggacgacaac
ctgctggactacatcgacttcagcagctgctgcgacatgcccttcttcgacgccgacggg
gacatcctccccgacctggaggtcgaccccaccgagtcgcttctcgccgagttctcctcg
ccggagacgagcccggcggcggcagacggcggcggcggcgctgaggccaagccgccggac
gagaagcaagaacaagtagcggcgaagacagcagcagcagaagagacgaaggcagacgat
gacgaaaaaacagcagcaggaggtgtagtagtgacgaggaagaggaacggggatgaggtg
acgacgacggaggaggattctgccggcgccggggccgggtccgacaccaagtcgtcggcg
gcggcgggtggccacagcaagaagaaggcgtcggcgggcaaggactccaacggcaagcgg
aaggtgaaggtggactggacgccggagttgcaccggcggttcgtgcaggcggtggagcag
ctgggcatcgacaaggccgtgccgtcacggatcctcgagatcatggggatagagggcctc
acacgacacaacattgcaagccacctccagaagtaccggtcgcacagaaagcacctgatg
gctcgggaggcggaggccgccacctgggcgcagaagcggcagctgtacgcggcggcgccg
gtggcgaggaaggtggaggcggcagctgctgcagggccgccgtgggtggtgccgaccatc
gggttcccgccgccgccgccgccggccatggctcctcctcctccgcccttctgccggccg
ctgcacgtgtggggccaccctcccacggcggcggtggaggctccggcgacgatgctgccg
gtgtggccgcggcacctggcgccgccccggccgtgggtggacccgggctactggcaccag
cagtacaacgcgggcaggacgaagtgggctccgccgcaggcagcagtgacgcaagggacg
ccgtgcgtgcctcctccgcccgccatggtccagctgcccaggtttccgcaccccatgtac
agcagaccacccgtgatggtgcctccgccgccgcccccgccgacgacgacaactacaaag
ctcgccgagttgcagcttcagctcgacgcgcacccgtccaaggagagcatcgacgcagcc
attggagacgttttagtgaagccatggctgccgctgccgctgggtctcaagccgccctcc
ctcgacagcgtcatgtccgagctgcacaagcaaggcatacccaagatcccaccggcgtcc
tccaccggctga
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