Setaria viridis (green foxtail): 117855602
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Entry
117855602 CDS
T07951
Name
(RefSeq) uncharacterized protein
KO
K11806
DDB1- and CUL4-associated factor 13
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
svs03009
]
117855602
04121 Ubiquitin system [BR:
svs04121
]
117855602
Ribosome biogenesis [BR:
svs03009
]
Eukaryotic type
90S particles
Other 90S particles
117855602
Ubiquitin system [BR:
svs04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
117855602
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Sof1
WD40_CDC20-Fz
WD40_Prp19
WDR55
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_EIPR1
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
NBCH_WD40
Beta-prop_DCAF4
WD40_RFWD3
Beta-prop_RIG_2nd
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
Beta-prop_SCAP
Beta-prop_IFT140_1st
eIF2A
WD40_MABP1-WDR62_1st
Beta-prop_Vps41
Beta-prop_IP5PC_F
Beta-prop_SPT8
PROPPIN
VID27
Motif
Other DBs
NCBI-GeneID:
117855602
NCBI-ProteinID:
XP_034593874
LinkDB
All DBs
Position
5:complement(239518..246474)
Genome browser
AA seq
452 aa
AA seq
DB search
MRVKVISRSTDEFTRDRSQDLQKVFRNYDPGLRSQEKAVEYTRALNAAKLEKIFAKPFIG
AMDGHMDAVSCMAKNPNHLKAIFSGSMDGDIRLWDIAARKTVCQFPGHQGAVRGLTTSTE
GDLLVSCGVDCTVRLWKVPMLKMVDTSDHIGDTSQPSAVYTWKHAFWGADHQWDGNLFAT
VGAQVDIWDPNRSEPVNSFEWGKDTVLSVRFDPGDCNILITSASDRSLTLYDLRMSSPAR
KLIMKTRCNSVCWNPREPMNFTAANEDTNCYSFDARRLDEAKIVHKGHVSAVMDIDYSPT
GREFVTGSYDRTVRIFNYLGDHSREIYHTKRMQRVFCVKYTYDGTYLVSGSDDTNLRLWK
SKASEQLGVLLPRERKKQEYLDAVKERYKHLPEVKRIVRHRHLPKPIYKAANMRRTMIEA
ENRKEERRRKHSAPGSMPVQPFRKRRIIKEVE
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgagggtgaaggtgatatcgcgctccaccgacgagttcacgcgcgaccgcagccaggac
ctgcagaaagtattccgcaactatgatccagggcttcgtagtcaagagaaagccgttgag
tacactcgtgcacttaatgctgcaaagttagagaaaatatttgctaagccatttattgga
gctatggatggacatatggatgcggtatcgtgcatggccaaaaaccccaatcatttgaaa
gcaatattttctggttcaatggatggagatattcgcctttgggacattgctgcgaggaag
acagtttgccaattccctggacaccaaggtgccgtacgaggtctaacaacatccacggaa
ggcgatcttcttgtatcatgtggcgttgactgcactgttcgactctggaaagttccaatg
cttaaaatggtggacactagcgatcacattggagacacttcccagccatcagcagtctat
acctggaagcatgcattctggggtgctgaccaccagtgggatggtaatctttttgcaact
gttggtgctcaagttgatatatgggatcctaacaggtcggagccagtaaatagctttgag
tggggtaaagatacagttctttctgtgcgatttgatcctggagattgcaatattttgatt
acatcagccagtgatcggagtctaacactttatgacctgcgcatgtcatctccagctaga
aagctaataatgaagacaaggtgcaattcggtatgctggaacccaagggagcccatgaac
tttactgctgcaaatgaagacacaaactgttactcctttgatgctagaaggctggatgaa
gccaaaattgttcacaaaggccatgtttcggcagtgatggatattgactactcaccgaca
gggcgtgaatttgttactggttcctatgatagaacagtaaggatttttaattatcttggt
gatcatagcagagagatttaccacaccaagaggatgcaaagggtgttttgtgtgaagtac
acctatgacgggacctatctagtctctggcagtgatgatacaaatcttcggctgtggaag
tccaaagcttcggaacaactcggagttcttcttccacgggagcgcaaaaaacaagaatac
ctggatgctgtgaaggagaggtacaagcacctcccagaagtgaagcggattgtgcggcat
cgacacctaccgaagccaatctacaaggcagccaacatgcggcgtacgatgattgaagcc
gagaaccggaaagaggagagaaggcgaaagcacagcgctccagggagcatgcccgtgcag
cccttcaggaagcgaaggatcatcaaagaagttgagtag
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