KEGG   Setaria viridis (green foxtail): 117855602
Entry
117855602         CDS       T07951                                 
Name
(RefSeq) uncharacterized protein
  KO
K11806  DDB1- and CUL4-associated factor 13
Organism
svs  Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:svs00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:svs03009]
    117855602
   04121 Ubiquitin system [BR:svs04121]
    117855602
Ribosome biogenesis [BR:svs03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    117855602
Ubiquitin system [BR:svs04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     117855602
SSDB
Motif
Pfam: WD40 Sof1 WD40_CDC20-Fz WD40_Prp19 WDR55 WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd EIF3I Beta-prop_EML Beta-prop_WDR75_1st Beta-prop_EIPR1 Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd NBCH_WD40 Beta-prop_DCAF4 WD40_RFWD3 Beta-prop_RIG_2nd WDR90_beta-prop_4th Beta-prop_IFT122_1st Beta-prop_SCAP Beta-prop_IFT140_1st eIF2A WD40_MABP1-WDR62_1st Beta-prop_Vps41 Beta-prop_IP5PC_F Beta-prop_SPT8 PROPPIN VID27
Other DBs
NCBI-GeneID: 117855602
NCBI-ProteinID: XP_034593874
LinkDB
Position
5:complement(239518..246474)
AA seq 452 aa
MRVKVISRSTDEFTRDRSQDLQKVFRNYDPGLRSQEKAVEYTRALNAAKLEKIFAKPFIG
AMDGHMDAVSCMAKNPNHLKAIFSGSMDGDIRLWDIAARKTVCQFPGHQGAVRGLTTSTE
GDLLVSCGVDCTVRLWKVPMLKMVDTSDHIGDTSQPSAVYTWKHAFWGADHQWDGNLFAT
VGAQVDIWDPNRSEPVNSFEWGKDTVLSVRFDPGDCNILITSASDRSLTLYDLRMSSPAR
KLIMKTRCNSVCWNPREPMNFTAANEDTNCYSFDARRLDEAKIVHKGHVSAVMDIDYSPT
GREFVTGSYDRTVRIFNYLGDHSREIYHTKRMQRVFCVKYTYDGTYLVSGSDDTNLRLWK
SKASEQLGVLLPRERKKQEYLDAVKERYKHLPEVKRIVRHRHLPKPIYKAANMRRTMIEA
ENRKEERRRKHSAPGSMPVQPFRKRRIIKEVE
NT seq 1359 nt   +upstreamnt  +downstreamnt
atgagggtgaaggtgatatcgcgctccaccgacgagttcacgcgcgaccgcagccaggac
ctgcagaaagtattccgcaactatgatccagggcttcgtagtcaagagaaagccgttgag
tacactcgtgcacttaatgctgcaaagttagagaaaatatttgctaagccatttattgga
gctatggatggacatatggatgcggtatcgtgcatggccaaaaaccccaatcatttgaaa
gcaatattttctggttcaatggatggagatattcgcctttgggacattgctgcgaggaag
acagtttgccaattccctggacaccaaggtgccgtacgaggtctaacaacatccacggaa
ggcgatcttcttgtatcatgtggcgttgactgcactgttcgactctggaaagttccaatg
cttaaaatggtggacactagcgatcacattggagacacttcccagccatcagcagtctat
acctggaagcatgcattctggggtgctgaccaccagtgggatggtaatctttttgcaact
gttggtgctcaagttgatatatgggatcctaacaggtcggagccagtaaatagctttgag
tggggtaaagatacagttctttctgtgcgatttgatcctggagattgcaatattttgatt
acatcagccagtgatcggagtctaacactttatgacctgcgcatgtcatctccagctaga
aagctaataatgaagacaaggtgcaattcggtatgctggaacccaagggagcccatgaac
tttactgctgcaaatgaagacacaaactgttactcctttgatgctagaaggctggatgaa
gccaaaattgttcacaaaggccatgtttcggcagtgatggatattgactactcaccgaca
gggcgtgaatttgttactggttcctatgatagaacagtaaggatttttaattatcttggt
gatcatagcagagagatttaccacaccaagaggatgcaaagggtgttttgtgtgaagtac
acctatgacgggacctatctagtctctggcagtgatgatacaaatcttcggctgtggaag
tccaaagcttcggaacaactcggagttcttcttccacgggagcgcaaaaaacaagaatac
ctggatgctgtgaaggagaggtacaagcacctcccagaagtgaagcggattgtgcggcat
cgacacctaccgaagccaatctacaaggcagccaacatgcggcgtacgatgattgaagcc
gagaaccggaaagaggagagaaggcgaaagcacagcgctccagggagcatgcccgtgcag
cccttcaggaagcgaaggatcatcaaagaagttgagtag

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