KEGG   Setaria viridis (green foxtail): 117855604
Entry
117855604         CDS       T07951                                 
Name
(RefSeq) THO complex subunit 7B-like
  KO
K13176  THO complex subunit 7
Organism
svs  Setaria viridis (green foxtail)
Pathway
svs03013  Nucleocytoplasmic transport
svs03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:svs00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    117855604
  09122 Translation
   03013 Nucleocytoplasmic transport
    117855604
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:svs03019]
    117855604
   03041 Spliceosome [BR:svs03041]
    117855604
Messenger RNA biogenesis [BR:svs03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     117855604
Spliceosome [BR:svs03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    117855604
SSDB
Motif
Pfam: THOC7 WHD_LYAR
Other DBs
NCBI-GeneID: 117855604
NCBI-ProteinID: XP_034593882
LinkDB
Position
1:29764575..29770067
AA seq 157 aa
MAVDTYSCLHKGALSCGNRFCKGIPSPGAGISTAATRTVKRVPAGVGHTPQEDDAIIKHR
LLTRTTTTRGEPPLKKLQKKFMSFATEIEKDADNTSDCERLYKAFLQEINTFELPLLKSK
AVVDANIREKESFNELQVEIERQILQVRSNLPFVYMW
NT seq 474 nt   +upstreamnt  +downstreamnt
atggccgtcgacacctactcctgcctccacaagggcgccctctcctgcggcaaccgcttc
tgcaagggcatcccctcgccgggcgccggcatcagcaccgcggccacccgcacggtgaag
cgcgtgcctgctggtgtcgggcatacaccccaggaggacgatgcgatcattaagcacagg
cttctgactaggacaactactaccaggggtgaaccaccactaaagaagcttcagaagaag
ttcatgtcctttgccactgagattgagaaggatgcagataacacaagtgactgcgagaga
ctgtacaaagccttcctacaggaaattaacacctttgaactgcctcttctgaaaagcaag
gctgttgttgatgcaaacattagggagaaggagagctttaatgagttgcaggttgagatt
gagcgacagatcttgcaagtaagaagcaatttgcccttcgtctacatgtggtga

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