Setaria viridis (green foxtail): 117855719
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Entry
117855719 CDS
T07951
Name
(RefSeq) putative ABC transporter B family member 8
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
117855719
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
svs02000
]
117855719
04147 Exosome [BR:
svs04147
]
117855719
04090 CD molecules [BR:
svs04090
]
117855719
Enzymes [BR:
svs01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
117855719
Transporters [BR:
svs02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
117855719
Exosome [BR:
svs04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
117855719
CD molecules [BR:
svs04090
]
Proteins
117855719
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
AAA_16
AAA_29
Zeta_toxin
AAA
ABC_ATPase
RsgA_GTPase
AAA_30
AAA_15
Motif
Other DBs
NCBI-GeneID:
117855719
NCBI-ProteinID:
XP_034593988
LinkDB
All DBs
Position
5:complement(34936779..34942975)
Genome browser
AA seq
1236 aa
AA seq
DB search
MAKKKASAPAGTGGGGERPMSIRGMFRFADRVDVLLMVLGTLGAIGDGCSTNLLLIFASD
VMNALGYGRGGGGGGGATVDFMHEVEKSCLNFVYLAFAVLAVAFMEGYCWSRTSERQVLR
IRYLYLQAILRQEVGFFDSQEATTSEIINSISKDASLIQEVLSEKVPLFLMHSTVFVSGL
AFATYFCWRLALISFPLVLLLIIPGLIYGKYLLYLSRQSRHEYANANSLVEQALGSIKTV
YSFTAEKRIIQKYTAILDKTIELGIKQGIAKGLAVGFTGLSFAIWAFLAWYGGRLVMHHQ
ASGGRIYAAGISFVLGGLSLGMALPELKHFTEASVAATRILDRINRVPQINADDPKGLVL
DQIRGELQFESVRFVYPSRPNMPVLKDFNLQIPAGQTIALVGSSGSGKSTAIALVQRFYD
ASEGTVKIDGFDIKELQLKWIRSKMGLVSQDHALFGTSIKENILFGKPDATMDEVYAAAM
TANAHNFIRGLPEEYETKIGERGALLSGGQKQRIAIARAIIKNPAILLLDEATSALDSES
EKLVQHALDQASMGRTTLVVAHKLSTVKNADQIAVVDGGAIAEIGTHDELINKGGTYSRL
VKLQKMVSYIDQENEQFRASSVARTSTSRHSVSRASPMPLTPAVLKEISSDVSPPAPSFS
RLLAMNAPEWRQAVIGSLSALVYGSLQPIYAITIGGMIAAFFVQDHNEMNAIIRRYALIF
CSLSMVSIVVNLLQHYNFAYMGEHLVRRIRVQVLEKILTFEAAWFDEETNSSGALCSRLS
NEASLVKTLVADRMSLLLQTASGIIIAVTMGLIVAWKLALVMIAVQPTTMICYYAKKIVL
SNVSRDLAKAQYQSTQIAIEAVYNHRMVTSFGCSSKVLQLFEHAQEEPLKRARKKSWVAG
LTTGLSPCLSFLSWALDFWYGGKLAQSGEISAGDVFKTFFVLVSTGKLIADAGSMTSDLA
KGANAVASVFEVLDRKSISPQNSQVEKEDQKKKIQGRIEFKKVDFSYPTRPECLILQDFS
LDVKAGTSVGLVGRSGCGKSTIIGLIQRFYDVDRGAVRIDGMDVREMNILWFRGFTALVS
QEPAMFSGSVRDNIAFGKPEADEDEIVEAAKAANAHEFISSLKDGYDTDCGEHGIQLSGG
QKQRIAIARAIIRNPAILLLDEATSALDAQSEQVVQEALDRIMSGRTTIVVAHRLNTIKN
VDSIAFLGEGKVVERGSYPQLMNKKGAFYNLATLQK
NT seq
3711 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagaagaaggcgagtgccccggcgggcaccggcggcggcggcgagcggccgatg
agcatccgcggcatgttccggttcgcggaccgggtggacgtcctgctcatggtgctgggc
actctgggggccatcggcgacgggtgctccaccaacctgctgctcatcttcgccagcgac
gtgatgaacgctctcgggtacgggcgcggcggcggcggcggcggcggcgcgaccgtggat
ttcatgcacgaggtggagaagtcgtgcctgaatttcgtgtacctggcgttcgcggtcttg
gcggtggcgttcatggaaggatactgctggagccggacgagcgagcggcaggtgctgcgg
atccggtacctgtacctgcaggccatcctgcggcaggaggtgggcttcttcgactcgcag
gaggccacaacctcagagatcatcaacagcatctccaaggatgcgtccctcatccaggag
gtcctcagcgagaaggtccctctatttctgatgcactctactgtcttcgtctccggactg
gccttcgccacttatttctgctggaggctggctctgatctcttttcctctggtcctgctt
ctcataatcccggggttgatctacggcaagtaccttctctacctctcccgccagtcgcgc
catgagtatgccaatgccaattccctggttgagcaagcgctgggctcgatcaagactgtc
tactcattcacagccgagaagaggatcatccagaagtacacggcgatccttgacaagacg
atcgagctggggataaagcagggcattgcgaagggtctcgctgttggattcaccggcctt
tctttcgccatttgggccttccttgcatggtatggcggcaggttggtgatgcaccatcag
gcaagtggtgggaggatatatgctgctgggatttccttcgtcttgggtggcctgtccctt
ggaatggcactccctgagctgaaacatttcactgaggcatctgttgctgccacgagaatt
ctcgatcggataaaccgtgtaccccagatcaacgctgacgacccgaagggccttgttttg
gatcaaatccggggagagcttcagtttgaatctgtccgttttgtgtacccgtcaaggcca
aatatgccagtcctcaaagacttcaacctccagattcctgctgggcaaaccatcgctctg
gttgggtctagtggcagcggcaagtcaaccgcaatagcgctagtgcagcgcttttatgat
gccagtgaaggaactgtcaagattgatggtttcgacattaaggaactccaactcaagtgg
atcaggagcaaaatggggcttgtcagccaagatcatgcattgtttggtacttcaataaaa
gagaacatcctgtttggcaaaccagacgcgaccatggatgaagtgtatgcagcagccatg
accgcaaatgctcacaacttcataagggggcttcccgaagaatacgagactaagattggc
gagcgtggggcattgttatcaggtggacaaaagcagcgtattgccattgcaagggcaatt
atcaagaatcctgctatacttttgcttgacgaagccacgagtgcacttgattcagaatca
gagaagttggtgcagcatgcgcttgatcaagcatctatgggacggacaactctggtagta
gctcataagctttcaaccgtgaagaatgctgatcaaattgctgtagttgatggcggtgca
atagctgaaattggtacacatgatgaattgatcaacaaagggggcacatactcaagactt
gtgaagttgcagaagatggtgagttacatcgatcaagaaaatgaacaatttagggcttca
tcagtggccaggaccagcaccagccgtcacagcgtgtccagagcaagtccaatgccactt
acaccagctgtcttaaaggaaattagttctgatgtttccccacctgcaccatctttctcc
aggcttcttgcaatgaatgcaccagagtggaggcaggcagtcataggcagtctgtctgca
ttggtatatggttccttgcagcccatctatgccataaccatcggaggaatgattgctgca
ttctttgttcaggaccacaatgagatgaatgcaataatcagacggtatgccttgatcttc
tgttcactgtccatggtatccattgtcgtaaatctattgcaacactacaattttgcatac
atgggggagcatcttgttaggcgaatccgagtccaagtacttgaaaagatcttaaccttt
gaggcagcatggtttgatgaagaaacaaattcaagtggtgcgttgtgctctcggctaagc
aatgaagcttctcttgtcaaaacccttgttgcagacagaatgtccttactgcttcaaaca
gcttctggaattataattgcggtgacaatgggcctgatagtagcttggaagcttgctctt
gtcatgatagctgtacaaccaactacaatgatatgctactatgccaaaaagatagtactc
tcaaatgtttcaagggacctggcaaaggctcagtaccaaagtactcagattgccatagaa
gctgtttacaaccacaggatggtaacctcctttggttgctcgtcaaaggttcttcagctc
ttcgagcatgcacaagaggaaccattgaaaagagcaaggaagaagtcatgggtagcaggg
ctgaccacaggattgtcaccttgcctctcattcttatcatgggcactggacttttggtat
ggtgggaagctggcacagtccggggagatctcagcgggtgatgttttcaaaacttttttc
gtcctggtgagcacaggaaagctgattgctgatgctggtagcatgacatcagacctggca
aagggagcaaatgcagttgcttctgtatttgaggtgctagataggaaatctatctctcca
caaaattcacaggtggaaaaggaagaccagaagaagaaaatacaaggaagaatagagttc
aaaaaggtagacttttcgtatccaacaagaccagaatgccttatcctacaggattttagc
ttggatgtgaaagcgggaacaagtgttggcctggttgggagaagtggttgtggtaaatct
actatcataggtttgatccaaagattctatgatgttgatagaggggccgtaaggattgat
ggcatggatgtgagggagatgaatattctttggtttcgaggatttacagctcttgttagt
caggagccagcaatgttttcaggtagtgtcagggataacattgcttttggtaaaccagaa
gctgatgaagatgagattgtggaggccgcaaaagctgcaaatgcacatgagttcatatca
tcattgaaggatggatatgatactgattgtggagagcacggtatacaactctcaggagga
cagaagcaaagaattgcaattgcaagggcaataatccggaatccagcaatactactgctt
gatgaagcaacaagtgcacttgatgcacagtcagagcaagtggtgcaggaagctcttgat
cgaataatgtcagggaggaccacaatcgtggtggcacatcgactaaacacaatcaagaat
gtagactcaattgctttcctgggcgagggtaaggtggtggagcgtggctcttacccacag
ctcatgaacaagaaaggggctttctacaacctcgcgactcttcagaagtaa
DBGET
integrated database retrieval system
