Setaria viridis (green foxtail): 117855739
Help
Entry
117855739 CDS
T07951
Name
(RefSeq) PHD finger protein At1g33420
KO
K26271
PHD finger protein MS1/MMD1
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
svs03000
]
117855739
Transcription factors [BR:
svs03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
117855739
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHD
PHD_5
PHD_2
DUF6832
Motif
Other DBs
NCBI-GeneID:
117855739
NCBI-ProteinID:
XP_034594007
LinkDB
All DBs
Position
5:42313027..42316446
Genome browser
AA seq
713 aa
AA seq
DB search
MVVNGRPLKRARTRVEARDFAGFPAAGDGGAAGTFREAVRGFLAKHARLLPLPSIFSPAA
AAAPPHLLIWRVSLSVGEEGEEETGGRVELNVVEEDVLRSRSVYCDQCRVVGWSGHPVCG
KRYHFIIENDCNQLSGHRRTCCLRCGTPMVAGESRCALCNFDMDGEEIEECAYLHLDDSS
HLLHAVVHANGYGHLLRVNGREGGSRFLTGRDIMSLWDRLCKVLHVRKVTVMDISKKHGM
DYRLLHAVTSGHPWYGEWGYKFGAGSFALTSETYQNAVDMLSSIQLALYFSNRSPIRTPL
QNTIALYWALSDRQLVTLRDLFRFIMHLLHQAQKMSKPSTYKRKELASDVLCAWTKDDFD
RAEAAMLKVLRVVQTGQWVSWRALRGAASKAVDSQELLDYSLRELGGKQLDDGHFVAVRC
NAETSAIEYRLESSSIRSPVNAATFEPSVEHLLHDLRFLYDALLNPESMLSSQPEVVGSS
AHSAAAKILDCKQFIKHYDKHALRTPSNPFLLSVRCSIELLDHPKDYTAPPEELVLLPAS
ATLAELKVQASRAFQETYLMFQSFQAEQLPDFPNFSDTTPVKHVLGSGQLVRLRGRCTGD
YRRIVQFRMERGLENWTVDCSCGAKDDDGERMLACDVCGVWQHTRCSGISDFEEVPENFI
CRKCASPRKGKGHGGGGSNGGGRVEVSAAGRCKDEIGSSVGGAGKFGRMATVG
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atggtggtgaacggccggccgctgaagagggcgaggacgcgggtggaggccagggacttc
gcggggttcccggcggccggagatggcggggcggccgggacgttcagggaggcggtgagg
gggttcctcgcgaagcacgcgaggctgctcccgcttccgtccatcttctcgccggcggcc
gccgccgccccgccgcacctgctgatctggagggtgtccctgagcgtcggggaggagggg
gaggaggagaccggcggcagggtcgagctcaacgtcgttgaggaggatgtgctccgatca
cgatctgtgtattgtgatcagtgcagagtcgtgggatggagtgggcacccagtctgtggg
aagcgataccatttcatcatcgagaacgactgcaaccagctttctggccaccggcgcacc
tgctgccttcgctgcggcactcccatggtcgctggagaatcaaggtgcgcactgtgcaac
tttgatatggatggtgaggagatcgaagagtgtgcatacctgcatttggatgactcctct
cacttgctgcacgctgtggtgcatgcaaacggctatgggcacctcctcagggtaaatggc
cgtgaaggtggttcaagattcctcactggccgtgacataatgagcttatgggatcgcttg
tgcaaggtgctgcatgtgaggaaggtcactgtcatggacatctccaagaaacatggaatg
gactacagactcctgcatgcagtcaccagtgggcacccatggtatggtgaatggggatac
aagtttggtgctggaagctttgcactaacctcagagacataccaaaatgcagtagatatg
ctttcaagtatacaactggcactgtacttctcgaacagaagccccatcaggactccattg
cagaacacaattgctctttattgggcactaagcgatcgccaactagtgacactacgggac
cttttccgctttattatgcacctgcttcatcaagctcagaagatgtcaaaaccctcaact
tataagcgcaaagaacttgcatctgatgtgctctgtgcgtggactaaagatgattttgat
cgagcagaagctgcaatgcttaaggttctccgggttgtgcaaaccggacagtgggtatct
tggcgtgcacttcggggagctgcatcaaaggctgttgattcacaagagctgcttgattat
tctcttcgagaactgggtggaaaacaactggatgatggccattttgttgctgtccgctgc
aatgctgagacaagtgcaatagagtacaggctggaatcttcctccattcggtcaccagtt
aatgcagcaacgtttgagccctctgttgaacatctcctgcatgatcttagattcctctat
gatgctctgctgaacccagagtccatgctgtcttcacagccagaggtggtgggttcatca
gcacatagtgcagcagcaaagattcttgattgcaagcagttcatcaagcattatgacaag
catgctctcaggactccttctaacccattcttgctctctgtgaggtgctccattgaacta
cttgatcacccaaaagactacacagcacctccagaggaacttgtacttttaccagcaagt
gctacccttgctgaactgaaagtgcaggcttcaagggcatttcaagagacgtacctcatg
ttccaaagcttccaagctgaacagctccctgactttccaaacttcagtgacacaaccccc
gtgaagcatgtgcttggatcaggccagcttgttcggttaagaggacggtgcactggagat
taccggaggattgtacagttcaggatggagaggggtttggagaactggactgtggactgc
tcatgtggtgccaaggatgatgatggggaacgtatgctagcatgtgatgtgtgtggagtc
tggcagcacaccagatgctcagggatcagcgattttgaggaagtccctgaaaatttcatc
tgcaggaagtgtgctagcccacgcaaaggaaaaggccatgggggtgggggtagcaatggt
ggtggaagagtggaggttagtgcggcagggaggtgcaaggacgagattggatcatctgtt
ggtggtgcaggcaagtttgggcgcatggcaacagttggatga
DBGET
integrated database retrieval system
