Setaria viridis (green foxtail): 117855907
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Entry
117855907 CDS
T07951
Name
(RefSeq) calreticulin-3
KO
K08057
calreticulin
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs04141
Protein processing in endoplasmic reticulum
svs04145
Phagosome
svs04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
117855907
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
117855907
04148 Efferocytosis
117855907
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
svs03110
]
117855907
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
svs04091
]
117855907
Chaperones and folding catalysts [BR:
svs03110
]
Other chaperones and cochaperones
Calnexin / calreticulin
117855907
Lectins [BR:
svs04091
]
L-type lectins
117855907
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Calreticulin
CDC45
Motif
Other DBs
NCBI-GeneID:
117855907
NCBI-ProteinID:
XP_034594198
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Position
5:42938775..42942815
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AA seq
408 aa
AA seq
DB search
MGRPRRGGGGLSGRLLVLSSLLLLASGEVFFEERFEDGWESRWVESDWKRSEGKAGRFKH
TAGRYSGDPDDKGIQTTMDARHFAISAKFPKFSNKNRTLVVQYSIKFEQDIECGGGYIKL
MSGYVNQKKFSGDTPYSLMFGPDICGTQTKKLHLILSYQGQNYPIKKDLECETDKLTHVY
TFILRPDASYSLLVDNRERESGSMYTDWDILPPRKIKDVHAKRPKDWDDREYIEDPDEVK
PEGYDSIPKQIPDPKDKKPDTWDDDDDGIWKPRMISNPAYKGPWKRKRIKNPNYKGKWKT
PWIDNPEFEDDPDLYVLKPLNYFGIEVWQVKAGSVFDNILICDDPDYARKVVEETVGANR
EAEKEAFEEAEKERKAREDRDAQKGKDEGNRRRRRRRPREWDDYHDEL
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgggtcgtcctcgccgcggcggcggcggcctgagcggccgcctcctcgtcctctcgtcg
ctgctgctcctagcgtccggcgaggtcttcttcgaggagcgattcgaagatggctgggag
tcgcggtgggtggaatctgattggaaaaggagtgaagggaaggctggaaggttcaagcac
acggcgggaagatactctggagatcctgatgacaaaggaatacaaacaacaatggatgct
aggcattttgctatttcagccaagttcccaaaattcagtaacaagaaccggacactggtg
gttcagtactccattaagtttgagcaggatatcgagtgtggtggtggatatattaagctt
atgtctggttatgtcaaccagaaaaaatttagtggggatactccatacagcttgatgttt
ggaccagatatatgtggtactcaaacaaagaagctccatcttatactttcttaccaaggg
cagaattaccccatcaagaaagatctagaatgtgagacagacaagttaacccacgtgtat
actttcattcttaggcctgacgcgtcttatagcctactggttgataaccgtgaaagagaa
tctgggagcatgtacactgattgggacatcctccctcctcgtaaaatcaaggatgttcac
gccaaaaggcctaaggattgggatgacagagagtatattgaagatcctgatgaggttaag
ccagagggctatgattctatcccgaaacagattcctgatccaaaggacaaaaagcctgac
acatgggatgatgatgatgatggcatatggaagcccagaatgatatcaaatccagcatac
aagggaccatggaaacgcaagagaattaagaatcctaactacaagggtaaatggaaaacc
ccatggattgataatccagagtttgaggatgatccagatctttatgtgctgaaacctttg
aactattttggaattgaagtttggcaggtaaaagctggttcagttttcgacaacattctg
atttgtgatgaccctgattatgcaagaaaagttgttgaagaaactgtgggtgcgaatagg
gaggctgaaaaggaagcttttgaagaagctgaaaaggagaggaaagctagagaagatagg
gatgctcaaaaaggaaaggatgaaggaaaccggcgccgaaggaggagacgtcccagggaa
tgggatgactaccatgatgagctgtga
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