Setaria viridis (green foxtail): 117855938
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Entry
117855938 CDS
T07951
Name
(RefSeq) dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2
KO
K12667
dolichyl-diphosphooligosaccharide---protein glycosyltransferase subunit 2 (ribophorin II)
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs00510
N-Glycan biosynthesis
svs00513
Various types of N-glycan biosynthesis
svs01100
Metabolic pathways
svs04141
Protein processing in endoplasmic reticulum
Module
svs_M00072
N-glycosylation by oligosaccharyltransferase
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00510 N-Glycan biosynthesis
117855938
00513 Various types of N-glycan biosynthesis
117855938
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
117855938
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GFIT
Motif
Pfam:
Ribophorin_II
Ribophorin_II_3rd
Ribophorin_II_C
Ribophorin_II_2nd
Motif
Other DBs
NCBI-GeneID:
117855938
NCBI-ProteinID:
XP_034594227
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All DBs
Position
5:43732324..43738006
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AA seq
694 aa
AA seq
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MAGRRPSPAALLILLVAAAFAPISTAVRPVSDAHRSAAAELFAPSADGSFGDLERTYEAV
RTFQILGLEKYKSETGKACKFAAEKLASPTSSAAKDLFHAARISGALGCSVDAGVYDGVV
ARLKAVIKDTNSLLEFYYSVGGLLSIKEQGHNVVLSDAESTFHAIKALSQSDGRWRYDTD
SAESSTFAAGIALEALAGVVSLADAEVDPSMVGVVKNDIVKLFDTIKSYDDGTFYFDEKH
VDATEYKGPITTSASVVRGVTSFATVASGKLNIPGEKILGLAKFFLGIGLPGSAKDCFNQ
IESLSFLENNRVFIPLILSLPSKVFSLTSKDQLKVEVTTVFRSAAPPLKVNLVQVLGSDS
KVITSENKELQFDLDNNVHYLDIAPLKIDVGKYSLVFEISLQEPEHETVYSTGGRNTENV
FITGLIKVDKAEIGISDNDAGTMESVQKLDLLKDTKVSLSANHLQKLRLSFQLTTPLGHT
FKPHQVFLKLKHESNVEHLFVVPGSARQFKLVLDFLGLVEKFYYLSGRYDLELAVGDAAM
ENSFLRPLGHLELDLPEAPEKAPKPPAQAVDPFSKFGPKAEISHIFRAPEKRPPKELSLA
FTGLTLLPFIGFLIGLMRLGVNLKNFPSLPGPAAFASLFHSGIGAVLLLYVLFWLKLDLF
TTLKYLGFLGIFLVFVGHRTLSYLSSVSTKQKTA
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atggccgggaggcgcccatccccggcggccctcctcatcctcctcgtcgccgcagccttc
gctcccatctccaccgccgtccgcccggtctccgacgcgcacagatccgcggctgccgag
ctcttcgccccctccgccgacggatccttcggcgatttggagaggacgtatgaggcggta
aggacgttccagatactcgggttggagaagtacaagagtgagactgggaaggcgtgcaag
tttgccgcagagaagttggcttcccccacctcttccgctgcgaaagatctgttccacgcg
gcccggatcagcggcgcgctcggatgcagtgttgatgccggcgtgtatgatggtgtcgtg
gcaaggcttaaggcagtgattaaggacacaaactccctgctggaattctactattctgta
ggaggtctgcttagcatcaaggaacaaggccacaatgttgttctatctgatgcagaaagc
acatttcacgccattaaggcacttagccaaagcgatgggagatggcgttatgacacagac
agtgctgaatctagcacatttgctgctggtatcgcgctagaagctttggcgggtgttgtt
tctctagcagatgctgaggttgatccatccatggtaggagtggtaaaaaatgacatcgtg
aagctgtttgacactatcaagagttatgatgatggcaccttctactttgacgagaagcat
gttgatgctactgagtacaagggcccaataacgacttctgcttcagtagtgcgtggtgtt
acctcttttgcaactgttgcctctgggaaattgaatatccctggtgagaaaatacttgga
ttggcaaagttcttccttggtatagggctccctggtagcgcaaaggattgctttaatcag
attgagtctttgtcattcctggagaacaatagggtcttcattcctttgatactgtcactt
ccttccaaagtattttcattgacttcgaaagatcagcttaaggttgaagtcacaacagtt
ttcagatctgctgctcctccactcaaagtgaatctggtacaagtgttgggttctgattct
aaagtcatcaccagtgagaacaaggaacttcaatttgaccttgacaacaatgttcattac
ttggacattgctccgttgaaaatagatgttgggaaatactctctagtttttgagatttca
cttcaggagccagagcatgagactgtttattctactggagggagaaacactgagaatgta
tttatcacaggactgatcaaagttgacaaggcagaaattggaatttctgataatgacgct
gggaccatggagtctgttcaaaagttagatcttctgaaagatacaaaagtgtctctctct
gcaaaccatctgcaaaagttgcgcttatcttttcaactaactacaccgcttgggcacacg
tttaaacctcaccaggtgttcttgaaattgaagcatgaaagcaatgttgaacacttattt
gtggtgcctggttctgcaaggcagtttaaacttgttctagacttcctaggtttggtggag
aaattttactacctttctggaagatatgaccttgagcttgcagttggtgatgctgctatg
gaaaattcgtttctacgacctcttgggcacttggagttggacctgccagaggccccagag
aaagccccaaaacctcccgcacaagctgttgacccattctcaaaatttgggccaaaggca
gagatatcacacatattccgtgcaccagagaagaggccaccaaaggaactctcgcttgca
ttcacgggtctcactcttctgcctttcatcggattcttgattgggctgatgcgtcttgga
gtgaacttgaagaacttcccatccttgccaggaccggctgcatttgcctcgcttttccac
tctggaataggagcagtcctgctgctctatgttctcttctggctcaagttggatcttttc
acaaccctgaagtacctaggcttcctcggcatcttccttgtgtttgtgggccataggacc
ctatcctacctctcctcggtgtcgacaaaacagaagactgcatga
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