Setaria viridis (green foxtail): 117855952
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Entry
117855952 CDS
T07951
Name
(RefSeq) syntaxin-61
KO
K08500
syntaxin of plants SYP6
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
117855952
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
svs04131
]
117855952
Membrane trafficking [BR:
svs04131
]
SNARE
SNAP-25[C] (Qc)
STX6
117855952
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GFIT
Motif
Pfam:
STX6_10_61_N
SNARE
MCU
DUF6366
Motif
Other DBs
NCBI-GeneID:
117855952
NCBI-ProteinID:
XP_034594244
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Position
5:complement(46153099..46156400)
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AA seq
232 aa
AA seq
DB search
MSSAQDPFYIVREEIQDSIDKLQSTFHRWEQTASNTGEYVHLTKDLLTSCESIEWQVDEL
EKTISVASRDPAYYGLDEVELSRRRNWTGSARNQVGTVRRAIEKGKSNSATSRYQDTSRT
NLYSAQDNDDFISSESDRQQLLMRQQDEELDELSASVQRIGGVGLTIHEELSGQERILND
LSLEMETTSNRLDFVQKRVAMVMKKAGIKGQIMLIAFLVVLFIILFVLVFLT
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
atgagctcggcgcaagatccattctacatcgtccgggaggagatccaggactcgattgat
aaactgcaaagtaccttccaccgttgggagcaaaccgcttcaaacacaggagaatatgtt
catctgacgaaggatcttctgaccagctgtgaaagcattgaatggcaggtagatgagctg
gaaaagactatctcagttgcatcaagggatccagcatactatggacttgatgaggtcgag
ctttctagacgaagaaactggactggttctgcccgtaatcaggttggtacagtcaggaga
gctatcgaaaaggggaagagcaattcagcaacttcaagataccaggacacaagcaggacc
aacctctattctgcccaagacaatgatgactttatttcctcagaatcagatagacagcag
ctacttatgaggcagcaggatgaagaacttgatgagctcagtgcgagtgtccaaaggatt
ggcggtgtagggttaaccatacatgaagagctgtctggacaggaaaggatcttaaacgac
ctaagcttggagatggagactacttccaaccgacttgatttcgtgcagaaaagagtggcc
atggtgatgaagaaggctggcatcaaggggcagatcatgttgatcgcgttcctggttgtt
ctattcattattctcttcgtcttggtgttcttgacatag
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