Setaria viridis (green foxtail): 117855973
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Entry
117855973 CDS
T07951
Name
(RefSeq) uncharacterized protein
KO
K15200
general transcription factor 3C polypeptide 2
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
svs03021
]
117855973
Transcription machinery [BR:
svs03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIC
117855973
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_IFT122_1st
WD40
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
ANAPC4_WD40
Motif
Other DBs
NCBI-GeneID:
117855973
NCBI-ProteinID:
XP_034594268
LinkDB
All DBs
Position
5:complement(41232943..41243161)
Genome browser
AA seq
1396 aa
AA seq
DB search
MAVPPETTEAPPPPEYREGTTKDGVEVCLFDESADGFSRAVRAISELADLEPEPDFTEAE
VERLASSITFLREWRHFSYEPKDVSFNNGIESTSSRDDMHSITLTQFSSVSVPQITQQED
RKDNTVSFDFMLFAGGNVWALDWCPSLCDKSGSSINCEYLAVAAHPPGSSYHKIGMPLTG
RGIIQVWCLLAPFEDAHSRRPLDACNSISRRGRPRKIPDGTNSVGCSSNPPKPRGRPRKR
PCNDQMEPVPKRPRGRPRKYPLPIGKLEDSSQNSGCQDIVLFDPLATSTGIPDDLPLAYA
LPTMNPVESTPKRGRGRPRKIPSDKLTGSSGAVSKDECTEPSPTTATCAKPKRPRGRPRK
YPVPINDKSASGADVDLGEETTCQPLTGPSGAVSKEDVCREPSPTTAICAKPKRQCGRPR
KYPVPINYKSVSGADVDLGQETVCTEFNANLSIVAVDAALPIVQKVTSSPATVVKESACI
EPSPNTATRKQPKRTRVRPQKYSDTDIELGKHTTGQPVSSECSLDHTACTESNLSIVAVD
SASLFTSSTTATCQKSKGQRSRAQNKKTISDALCSPVVSGVESRSMCSRQLNGATASVES
ALLKMVSVTSGLCSASMLNFEDNVHRGALSGDSLQPIKISPKSRESSGRKGRGRPKKSLL
SVGTSCLVASDANFPVTTSVLPSDNNLTSLVKSDGEFIASNLGSIGSSGLGVEKSGVHAG
VVPSDAASPGHGLYNANFKEESSTKRGSGSRKKLVSTVHSHFTDFSGKEQKTKTTQKSSD
PVILVENCMNGPCPRKGGGQPQRIPASNESTSTSVGDETHTMERFLTPMTTGPPRSEDMA
DEAGLIQANNGIVNCEGMKLNERIAANVTSHCNENAQTNQVAPNFKNSDRLIDEVEATEL
VPLKEPREDVNMFCSVENSNSSPIPKDIALPRLVLCLAHNGKVAWDIKWKPPVVSQPEQK
SRLGFLAVLLGNGSLEVWEVPSPCMIQKIYSPSKVEGSDPRFLKLQPVFRCVKVKCGNRQ
SIPLTVDWSPSPPHDMILAGCHDGTVALWNFSMNLSSQDSKPFMCVIAESVPIRALSWAP
YISDENINTFVTAGADGLKFWDLRDPYRPLWELTTAPRAVLSLQWLKDGRGIVISMEDGT
LKFLSLPRIANDVPATGRPFVGTKNQGVATYQLSEYLIWSVHASDTTGCAAYCGADGTAV
CFQLTPRFWEKEPGRNRVPYFLCGSLSEDGENIKIGSRPQTSPLPNVPVANKKGPKPCQN
IVQALPAGNVIGNPALGDDQNDGHNEEQGAGAENPEPGDNFDDGQNEGGAGVVNPELGDQ
DGHSEEQEAGAIVLVGPTEQEDDGTLNSKGSESPKDFEVFPPKSVALHRVRWNMNKGSER
WLCYGGAAGIVRCQRI
NT seq
4191 nt
NT seq
+upstream
nt +downstream
nt
atggccgtgcctccggagacgacggaggcgccgcccccgccggaatatagagaggggact
actaaggatggcgttgaggtgtgcctgtttgacgaatcagcagatgggttctcaagagcg
gtgcgcgccatctcggagctcgccgacttggagcccgaaccagacttcactgaagcggaa
gtcgagcggcttgcctcctcaataacgttcctcagagaatggaggcacttctcttatgag
ccaaaagatgtaagtttcaataatggcatcgagtccacttcatcaagagatgacatgcac
agtataaccttaacacagttttcatctgtgtctgttccccagatcacacagcaggaagat
cggaaggataatacagtcagttttgattttatgttattcgctgggggaaatgtctgggcc
ttggactggtgcccaagcttgtgcgacaagtctggctcttctataaactgtgagtatctt
gctgttgctgctcaccctcctggttcttcttaccataaaattggtatgcccttaaccggg
agaggtattattcaagtttggtgtctcttagcaccatttgaagacgcacattctcgtcgg
ccactggatgcatgcaatagtattagtcggagaggaagacctagaaaaataccagatggg
actaattctgttggttgttcatccaacccaccaaagccaagggggaggccaagaaagaga
ccttgtaatgatcagatggaacctgttccaaaaagaccaagaggcagaccgagaaaatat
ccactgccaattggtaaattggaagattcatcccaaaatagtggatgtcaggatattgtt
ctgtttgatcctcttgccacttcaacaggtattcccgacgaccttccattggcttatgcc
ttgccaaccatgaatcctgtggaatcaactccaaaaagaggtagagggcgacctaggaaa
atcccaagtgacaaactgacaggttcatctggtgctgtatccaaagatgagtgtacagag
ccttctccaacaactgcaacctgtgccaaaccaaagagaccacgtgggaggcctcgaaag
tatccggttccgatcaacgacaaatctgcttcaggcgctgatgttgatttaggggaagag
acaacttgtcagcctctaacaggtccatctggtgctgtatcaaaagaagatgtgtgcaga
gagccatctccaacaactgcaatctgtgcaaaaccaaagagacaatgtgggaggcctcga
aagtatccagttccaatcaactataaatctgtttcaggcgctgatgttgatttagggcaa
gagacagtttgcacagagtttaatgctaatttaagtattgttgcagttgatgcagctttg
ccaattgttcaaaaagtgaccagttcgcctgccactgtagtaaaagaaagtgcatgcata
gaaccatctccaaatactgccactcgtaagcaaccaaagaggacacgggtgaggcctcaa
aagtattcagatactgatattgaattagggaaacatacaactggtcagcctgtttcatca
gaatgcagtttggaccacactgcttgcacagagtctaatttaagcattgttgcagttgat
tcagcatcactatttacatcttcaactactgcaacttgtcagaagtcgaaaggtcagagg
agtagagcacaaaataagaaaacaatttctgatgcactatgttccccagttgtttctggt
gttgaatcacggagcatgtgttccagacaactaaatggtgcaacagcctctgttgaaagt
gctttactgaagatggtatcagtgacaagtggcctttgttctgctagcatgttaaacttt
gaggacaatgtacaccgaggcgctctttcaggtgattctttacagcctatcaagatttca
cctaaatcaagggagtcaagtggtaggaagggaagaggaaggcctaagaagagtctgctt
tctgttggaactagttgtttagtggcttctgatgccaacttcccagtgacaacatctgta
cttcccagtgacaacaatctcacatctttggtcaagagtgatggtgaatttatagcaagt
aatcttggttcgattggttcaagtgggcttggtgttgagaaatctggtgttcatgcgggt
gttgtaccatctgatgctgcatcaccagggcatggcttatataatgcaaattttaaggaa
gaatcaagtaccaaaagaggaagtggttctaggaagaagcttgtttcaactgtgcacagt
cattttacagattttagtggcaaagaacaaaaaacaaagacaactcaaaagtcgagcgat
cctgtgatcttggttgaaaattgtatgaatggaccatgccccaggaaaggtggggggcaa
cctcaaaggatacctgcttcaaatgagagtactagcacatctgttggtgatgaaacacac
acaatggagagatttctcacacctatgacaaccggaccacctagaagtgaagacatggct
gatgaggctggtttgattcaggctaacaatggaattgttaattgtgaaggcatgaaacta
aatgaaaggattgcagccaatgttacttctcattgtaacgaaaatgcacaaacaaatcaa
gttgcacccaatttcaagaacagtgataggcttattgatgaagtggaagctacagaactc
gtaccactcaaggaaccaagggaagatgtcaatatgttttgtagtgtagaaaactcaaac
tcttctccaatcccaaaagacattgctctaccaaggcttgtcttgtgtttagctcacaat
ggcaaagttgcttgggatatcaaatggaagcctcctgtagtaagtcagcctgaacagaaa
tcacgcctgggtttccttgcagtattgttggggaatggctctcttgaagtgtgggaagtt
ccatcaccatgcatgatccagaaaatatattccccctctaaggtagagggttccgaccct
cgttttctaaagctacaacctgtatttaggtgtgtcaaagtgaagtgcgggaacagacaa
agcattcccttgacagttgattggtcaccttctcctcctcatgatatgatattggcgggt
tgtcatgatggaacggttgctttatggaacttctcaatgaacctgtcatcacaagattca
aaaccttttatgtgcgtcattgctgaatctgttcccattagagctctttcttgggcacct
tatataagcgacgaaaacataaatacctttgttactgctggagcagatggtctaaagttc
tgggatttaagagatccataccgtcctctttgggagctaactactgctccaagggctgta
ttaagtcttcagtggttaaaggatggaagggggattgtcatctcaatggaagatggtaca
ttgaagtttctgagcttgccccggattgcaaatgatgtcccagccactggaaggccattt
gttggaacaaaaaatcagggcgttgcaacttatcagttatcagaatatttgatttggagt
gtccacgcctcagacactacaggttgtgctgcttactgtggggcagatggtactgctgtg
tgcttccagcttactccgaggttctgggagaaggaacctgggcggaaccgtgttccttat
ttcctctgtggatcattatcagaggatggagaaaatattaagattggcagcagaccgcaa
acatctccattaccaaatgttcctgtggcgaacaaaaagggtccaaaaccgtgccaaaat
atagttcaggccctgcctgcaggcaatgtcattggtaatccagcacttggcgatgatcaa
aatgatggacacaacgaagaacaaggagcaggtgctgaaaatccagaacctggcgataat
tttgatgatggacagaatgaaggaggagcaggtgttgtcaatcctgaacttggcgatcaa
gatggacacagcgaagaacaagaagcaggtgctatagttttagttggccctacagagcaa
gaggatgatggcacattgaacagcaagggcagtgaatcccctaaagactttgaggtcttc
cctcccaaatccgtcgcattgcatcgagtgcgatggaacatgaacaaaggtagtgagaga
tggctgtgctacggaggtgctgcaggcatcgtgcggtgtcagaggatctaa
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