Setaria viridis (green foxtail): 117856080
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Entry
117856080 CDS
T07951
Name
(RefSeq) long chain acyl-CoA synthetase 4 isoform X1
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs00061
Fatty acid biosynthesis
svs00071
Fatty acid degradation
svs01100
Metabolic pathways
svs01212
Fatty acid metabolism
svs04146
Peroxisome
Module
svs_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
117856080
00071 Fatty acid degradation
117856080
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
117856080
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
svs01004
]
117856080
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
svs04147
]
117856080
Enzymes [BR:
svs01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
117856080
Lipid biosynthesis proteins [BR:
svs01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
117856080
Exosome [BR:
svs04147
]
Exosomal proteins
Exosomal proteins of breast milk
117856080
Exosomal proteins of breast cancer cells
117856080
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
117856080
NCBI-ProteinID:
XP_034594399
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Position
5:30942453..30950636
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AA seq
677 aa
AA seq
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MELAVPLASREARVGGRLLACFFCFFWLRVVDVFVLLVLLQSKIRNAPFGYLPLFPFTET
GISYTSSFSRMAVEKYPNNRMLGHREIVDGKAGAYVWKTYKEVFDIANKIGNSIRSCGLA
KGSRCGIYGANCPEWIITMEACNAHGIYCVPLYDTLGAGAVEFILCHAEVEIAFAEEKKI
ELLLKTLPKSNEFLKTIVSFGKVTQEQKEEASKFGLSIYSWDEFLSLEADQEFDLPVKEK
TDICTIMYTSGTTGDPKGVLISNASIICLIAGVDRLLNCVNEELAESDVYMSYLPLAHIF
DRVVEELFIFHGASIGFWRGDVKLLVEDIGVLKPTILCAVPRVLDRIFSGLQAKISSGGF
IKSTLFNLAYKFKQFRMMRGAKHDEAAAICDKVVFSKVKEGLGGNVRVILSGAAPLATHV
EEYLRVVTCAHVIQGYGLTETCAGSFVSLPNQMSMVGTVGPPVPNIDVRLESVPEMNYDA
LARTARGEICIKGETLFSGYYKREDLTKEVLVDGWFHTGDIGEWQPDGSMKIIDRKKNIF
KLSQGEYVAVENLENIYGLVSAIDSIWIYGNSFESFLVAVVNPNKEALESWAAANGISGD
FESLCQNPKAKEYILGELSRIGKEKKLKGFEFIKDVHLEPVPFDMDRDLITPTYKKKRPQ
LLKYYQGVIDNMYKSAK
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atggagcttgctgttccattagcgagccgtgaggcgagagttggcggaagattgcttgct
tgcttcttttgtttcttttggcttcgcgtggttgatgtgttcgtgctgctcgtgctcttg
cagagcaagattcggaatgcccctttcggttatttgcctctgttccctttcacggagact
ggtatttcctacacgagcagtttttctcggatggcagtggaaaagtatccaaacaacaga
atgcttggtcaccgtgagattgttgatgggaaggctggtgcatatgtctggaagacatac
aaggaggtgtttgacattgcaaacaaaattggtaactctatcaggagctgtggacttgca
aagggtagtcgttgtggtatctatggtgctaattgtcctgaatggattatcacaatggag
gcttgcaatgcccatggaatctactgtgtcccattatatgatacacttggagctggtgcg
gtagagtttattctatgccatgcagaagttgagattgcttttgctgaggaaaagaaaatt
gagttgctcttgaagaccttacccaagtcaaatgagttcttgaaaacgattgtgagtttt
ggcaaggtaactcaagaacaaaaggaagaagcttccaaatttgggctgtcaatctactca
tgggatgaatttctgtccctggaggctgaccaagaatttgatcttccagtcaaggagaag
acagatatatgcactataatgtatactagtggaactactggtgacccaaaaggagtactg
atatccaatgcaagcattatttgtctcattgctggtgtggaccggctacttaactgtgta
aacgaggagctggcagaaagtgatgtttacatgtcttaccttcctctcgcgcacatcttt
gaccgtgttgtggaggagttgtttattttccatggtgcctctattgggttttggcgtggg
gatgttaagctgctggttgaagatattggtgttctgaaaccaacaatcttgtgtgctgtc
ccacgtgttcttgatcggatattttctggactacaagctaaaatttcctctggtggtttt
ataaagagcactctgttcaatcttgcttacaagttcaagcagtttagaatgatgagagga
gctaagcacgatgaagctgctgccatatgtgacaaagtagtttttagtaaggtgaaagag
ggtcttggtggcaatgttagggtcattttatctggagctgctccacttgctacccatgtt
gaagaatacttgcgagtggtgacgtgtgcacacgtcatacaaggatatggtctcacggaa
acttgtgctggatcttttgtctcgttaccgaatcagatgtccatggtagggactgttggc
cccccagtgccaaatattgatgttcgtctggagtctgtcccagaaatgaattatgatgca
cttgcaagaacagctcgtggagagatctgcatcaagggagaaacattattctcaggatac
tacaagcgtgaagaccttacaaaggaggtcttggttgatggatggttccatactggtgac
attggtgagtggcagcctgatggaagtatgaaaatcatagatcgcaaaaagaatatattc
aaactttcacagggagaatatgtggcagttgagaatttggagaatatttatggccttgtt
tctgctatagattcgatatggatatatgggaacagctttgaatccttccttgttgctgtg
gtcaatcccaacaaggaggctcttgagagttgggctgctgcaaatggaataagtggtgat
tttgagtccttgtgccagaatccgaaagcaaaagaatacattttaggagaactgtcaaga
ataggaaaagagaagaagctcaaaggttttgaattcatcaaagatgtacacctcgaacca
gtgccctttgatatggatcgtgacttgatcactccgacatataaaaagaaacggccgcag
ttgctcaagtactaccagggcgtcattgacaacatgtacaaaagtgccaagtga
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