KEGG   Setaria viridis (green foxtail): 117856088
Entry
117856088         CDS       T07951                                 
Name
(RefSeq) DNA damage-binding protein 2
  KO
K10140  DNA damage-binding protein 2
Organism
svs  Setaria viridis (green foxtail)
Pathway
svs03420  Nucleotide excision repair
svs04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:svs00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    117856088
  09124 Replication and repair
   03420 Nucleotide excision repair
    117856088
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:svs04121]
    117856088
   03400 DNA repair and recombination proteins [BR:svs03400]
    117856088
Ubiquitin system [BR:svs04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     117856088
DNA repair and recombination proteins [BR:svs03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      117856088
SSDB
Motif
Pfam: WD40 WD40_CDC20-Fz WD40_Prp19 Beta-prop_EIPR1 WDR55 Beta-prop_RIG_2nd Beta-prop_EML Beta-prop_TEP1_2nd WD40_WDHD1_1st Beta-prop_EML_2 WD40_MABP1-WDR62_2nd Beta-prop_IFT140_1st
Other DBs
NCBI-GeneID: 117856088
NCBI-ProteinID: XP_034594408
LinkDB
Position
5:complement(7669524..7673725)
AA seq 584 aa
MGPTTRTQFVYNRRRRRRSGGRRAVEEASDEEEQRQDTSSSSSDDEGDEEEEAEASGEEV
DDDDVEEVEEEAAAAEPAAKERPEKRGGRKGPITISLKKVCKVCKRTGHEAGFKGAVYID
CPMKPCFLCKMPGHTTLTCPHRVAMEHGVIPAPRRNTNTSLDYVFQSQVKGKISMVKPKF
LIPNQLECGNIKFHQRRVTCLEFHPTKNNVLLSGDKKGLLGIWDYVKLHEKITYDSVHSC
ILNSMKIDTSNDGILYTASSDGTISCTDLDTGIGSSLLNLNPNGWNGPSSWRMIYGMDLN
TDKGLLLVADNFGFLYFLDRRSKTRIGHPTLIHKKGSKVTSLHCNPARPEVLLSSGNDHY
ARIWDTRKLEANSPLASLAHGRVVNSGYFSPQSGNKILTTCQDNRIRVWDYIFGDLQSPS
REIVHSHDFNRHLTPFKAEWDPKDYTETVAVIGRYISENYNGVALHPIDFIDTSSGKLLA
EVMDPDITTISPVNKLHPQDDILATGSSRSIFIWKPKIEDEFTEERTKQKAKEYVYGSGS
RKKSNGKPDNSSDDDSDGDSGRKNKKAKKTRFTHTAKGKGKSKV
NT seq 1755 nt   +upstreamnt  +downstreamnt
atgggccccacaacccgcacccagttcgtctacaaccgccgccgccgccgccgcagcggc
gggcggcgcgccgtcgaggaggcctccgacgaagaggagcagcggcaagacacctcctcc
tcatcctccgacgacgaaggagacgaggaagaagaagcggaagcgtccggagaagaagtc
gatgacgacgacgtggaggaggtcgaagaggaggcggcggctgccgagcccgcggctaag
gagcgtcccgagaagaggggcgggaggaagggcccgatcaccatcagcctcaagaaagtg
tgcaaggtgtgcaaaaggacagggcacgaggcagggttcaagggggccgtgtacatcgac
tgccccatgaagccttgcttcctatgcaaaatgccaggtcatacaactttgacttgccca
catagagtagcaatggagcatggagttatcccagcccctagaaggaatacaaacacttca
ttagattatgtctttcagagccaagtcaagggcaagatttccatggttaagcccaagttt
ctgatacccaatcaactagagtgtggaaacataaaatttcatcagagacgtgtgacttgc
ttggaatttcatccaactaagaacaatgttcttttatcaggagataagaaagggcttctg
ggtatttgggattatgttaagttgcacgagaagattacatatgattctgtgcactcctgc
attctgaacagtatgaagattgatacctccaacgatggaatactatatacagcttcctct
gatggtactatcagttgcacagacttggatactggcattggctcctccttgttaaatctc
aacccgaatggttggaatggtccaagctcttggcgcatgatatatgggatggacttaaac
actgacaaaggtcttcttttggtggcagataactttggttttctttacttcctggataga
cgatcaaagactagaattgggcatccaactcttatacataaaaagggtagcaaggtaacc
agccttcattgcaaccctgcacgacctgaagttcttctgagcagtgggaatgatcactat
gcccgtatttgggatacaaggaagcttgaagcgaactcgccccttgccagccttgctcat
ggacgggtggttaattcaggttatttttctccacaaagtgggaataagatcttgacaaca
tgtcaggacaaccgtattcgtgtatgggactatattttcggtgatcttcaatccccaagt
agagaaattgtgcacagtcatgatttcaatcgtcacctgacacccttcaaagctgagtgg
gatccaaaggattacacagaaacagttgcagtcattggccgttacataagtgagaactac
aacggtgttgctctgcatcccatcgatttcatagataccagttctgggaagcttctggct
gaggtgatggaccctgacataacaacaatcagcccagtgaacaagctacacccgcaagat
gacatcctggcaacaggaagctcaaggtccattttcatttggaaaccaaagattgaagat
gaatttacagaagaaaggaccaaacagaaggccaaggaatatgtatatggatcaggttcc
cggaagaaatcaaatggcaagcctgacaatagtagtgatgacgactcagatggcgattct
ggcagaaagaacaagaaagcaaagaagactcgtttcactcacaccgcaaaaggaaaaggc
aaatccaaagtctga

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