Setaria viridis (green foxtail): 117856130
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Entry
117856130 CDS
T07951
Name
(RefSeq) rhamnogalacturonan I rhamnosyltransferase 1
KO
K23280
rhamnogalacturonan I rhamnosyltransferase [EC:
2.4.1.351
]
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
svs01003
]
117856130
Enzymes [BR:
svs01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.351 rhamnogalacturonan I rhamnosyltransferase
117856130
Glycosyltransferases [BR:
svs01003
]
Polysaccharide
Structural polysaccharide
117856130
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
O-FucT
Motif
Other DBs
NCBI-GeneID:
117856130
NCBI-ProteinID:
XP_034594456
LinkDB
All DBs
Position
5:9262953..9266765
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AA seq
493 aa
AA seq
DB search
MVAVGGGGGRRRRAWRWAMRAAASAVLWTAVVQLASIAGLFRPRVLADCGGGGGGAGGGG
GAAAGLAALAGEDSVAARLSPPALVPKRIYKSNGYLRVTCNGGLNQMRAGICDMVTIARH
LNLTLVVPELDKRSFWADPSDFGDIFDVDHFINSLRDELMIVKELPLKLQLRTKKRLYSM
PPVSWSNETYYLKRILPLAMKHKVIHFEKSDARLANNGLPVQLQMLRCRVNFEALRFTPQ
IEALGRKLISTLQRSGKFVVLHLRYEMDMLSFSGCTHGCSSKETEELTRMRYAYPWWKEK
EIDSEAKRLQGLCPLTPEEITLVLKALGFTKDTLIYIASGEIYGGERRLAALKTAYPKLV
RKEKILSPDELRPFQNHSTQMAALDYMVSLASDIFIPSYDGNMARVVEGHRRYMGFRKTI
VLDRKKLVELLDLFQGGALSWDEFSDAVKEAHKSRMGQPTERKIMPGQPKEEDYFYANPQ
ECLGSNGGLRDIS
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atggtggccgtcggtggcggaggggggcggcggaggcgggcgtggcggtgggccatgcgg
gcggcggccagcgccgtgctgtggaccgcggtcgtgcagctcgcctccatcgccgggctg
ttccggccgcgcgtcctcgcggactgcggcggcggcggcggcggtgcgggaggcggaggg
ggcgccgccgcggggctcgccgcgctcgccggcgaggacagcgtcgccgcgaggctctcg
ccgccggcgctcgtgcccaagagaatttataaaagcaatggttatctacgagtgacttgc
aatggtggcctcaatcaaatgcgagctgggatatgtgatatggtgactatagcccgccat
ctaaatctaacgctagtggtccctgaactggacaaaaggtctttctgggctgatccaagt
gattttggagatatttttgatgtggatcacttcattaattccctgagagatgagctgatg
attgtcaaagaactgcctttgaaacttcagttaagaactaagaagagactatactcgatg
cctcctgtcagctggtcgaatgaaacatactacctaaagcggatattacctctggcaatg
aagcacaaagtgatccattttgagaaatcagatgctcgccttgcaaacaatggccttcca
gttcagctccagatgctgcgttgccgtgtaaactttgaggctttgagattcaccccacag
attgaggcccttggcaggaaacttatctccaccctacagagaagtgggaaatttgttgtg
cttcacttgcgctatgaaatggacatgctgtccttttcaggttgcacacatggctgttct
agtaaagaaactgaggagctcactagaatgagatacgcttatccatggtggaaggaaaag
gagatcgattctgaagcgaagaggcttcagggactttgccctctcacaccagaggaaatt
actctagttctcaaagctctaggattcacaaaggatacactgatatacattgcttctggt
gagatttatggtggggagaggcgcttggctgcactcaagactgcataccctaaactagta
aggaaggagaaaattttatctcctgatgaactgcggccattccagaaccattcaacccag
atggcagcactggattacatggtttctctagcaagcgatattttcattcccagctatgat
ggaaatatggcaagggttgttgaaggtcatcgcaggtacatgggttttcgcaagaccatt
gtattggacagaaagaagcttgttgaactcttggaccttttccaaggaggtgcgctatct
tgggatgaattctcagatgcagtgaaggaggcacacaagagccgcatgggccaacctaca
gaacgaaagatcatgcctggccagcccaaggaagaggactatttctatgctaatcctcaa
gaatgcctgggctccaatgggggattaagagacatttcctga
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