Setaria viridis (green foxtail): 117856147
Help
Entry
117856147 CDS
T07951
Name
(RefSeq) vacuolar protein sorting-associated protein 60.1
KO
K12198
charged multivesicular body protein 5
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117856147
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
svs04131
]
117856147
Membrane trafficking [BR:
svs04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-III complex
117856147
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Snf7
Prefoldin
COG6_N
HTH_Tnp_Tc5
SOAR
Motif
Other DBs
NCBI-GeneID:
117856147
NCBI-ProteinID:
XP_034594472
LinkDB
All DBs
Position
5:complement(5138107..5140524)
Genome browser
AA seq
229 aa
AA seq
DB search
MKKIFGAKKDKGPPPSIQDATERINKRGETVDEKIKKLDEELARYKEQIRKTRPGPSQEA
IKARAIRLLKHKRMYEEQRNMLYNQTYNLDQVAFAADGLKDAQQTMNAMKAANKELKGMM
KTVKIEDIDNMQDEMTDLMDVSNEIQETLGRSYNIPDDVDEEELMGELDALESDMEFESA
AVPSYLQPETDFDADLNLPAAPTRPAAVPAGGQEDELGLPAVPRASLRS
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagatcttcggcgctaaaaaggacaaggggccgccgccctccatccaggacgcc
accgagcgaataaacaagcggggcgagacggtggacgagaagatcaagaagctggacgag
gagctggcaaggtacaaggagcagatccgcaagacccgccccggcccgtcccaggaggcc
atcaaggcgcgcgccatccgactcctcaagcacaagcgcatgtatgaggagcaacgcaac
atgctgtacaaccaaacctacaatctagaccaagttgcctttgctgctgatggcctcaag
gacgctcagcagactatgaatgctatgaaggcagcgaacaaggagctcaagggaatgatg
aaaaccgtcaagattgaggacattgataatatgcaagatgaaatgacggatctgatggat
gtgagcaatgagatacaagaaactcttggtagaagctataacatacctgatgatgttgat
gaggaagaactgatgggggagctggatgctttggagtctgatatggagtttgagtcagct
gcagtcccatcatatcttcagccagaaactgattttgatgctgatctcaatttacctgcc
gcaccaacacgtcctgcagcagtcccagcaggggggcaggaggatgaactaggattgcca
gcggtgcctcgcgcatcacttcgcagttag
DBGET
integrated database retrieval system
