Setaria viridis (green foxtail): 117856527
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Entry
117856527 CDS
T07951
Name
(RefSeq) ubiquitin-like modifier-activating enzyme atg7
KO
K08337
ubiquitin-like modifier-activating enzyme ATG7
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
117856527
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
svs04131
]
117856527
04121 Ubiquitin system [BR:
svs04121
]
117856527
03029 Mitochondrial biogenesis [BR:
svs03029
]
117856527
Membrane trafficking [BR:
svs04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
117856527
Atg8 conjugation proteins
117856527
Ubiquitin system [BR:
svs04121
]
Ubiquitin-activating enzymes (E1)
UBL-activating enzymes
117856527
Mitochondrial biogenesis [BR:
svs03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
117856527
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG7_N
ThiF
Shikimate_DH
Pyr_redox_2
Pyr_redox
ELFV_dehydrog
2-Hacid_dh_C
Motif
Other DBs
NCBI-GeneID:
117856527
NCBI-ProteinID:
XP_034594761
LinkDB
All DBs
Position
5:complement(28525352..28538457)
Genome browser
AA seq
1020 aa
AA seq
DB search
MAGVGAAGFPRQLMVESIPFLADVGFWDALRRLKLDVLATDDSPIPITGYYAPRRFRQAS
LFNLRSESLVPPSHNPVGDRNSCPILGTLINTNNMRGFQDLDRELLLKTEAKKILHDIVS
GKVEEDPALLLRFLVISFADLKNWKIYYNVAFPSLVFNSTLLSLQVASEVLSNEEVESLK
IALQEWRASTETTVIPFFLVTISSDSSASIRQLKDWKTCQGKYQKLLFGFYDHGRRPDCP
GWAIRNYIAFLSIRWKIEKVQFFCYREFQGNPDLVQSLIGEASFPSPSGWDDPDHVPDAF
GWEGVKPGKGTKDMKPKEIDIQSSNPASQDEEKQLMHLKLMGWRHFPVNIDKLSQVRVLV
LGAGTLGCEVARLLMTWGVRKLTVVDSGSVAMSDLVKQSLYIDKDCGVPRATAIVPHLKS
RCPAVEVEGIQMEIPVPGHPYSPSKMAGVLDDCKHLQTLVAANDAVFLLTDTWESRWLPT
LLCASENKIAITAVLGCDSYIVMRHGAGPGTSGGTDEVAAQIENLSTEDALSHQRLGCCF
CNDAASLFNTIPNGTLPGLTSVASGKAVELFARMLHHPDELHAPGDIAGMETEHQLGLLP
HQLQGSLPKCVLSMELGNSSGNCTACSIAVLSEYRRRGLDFVMQAINYPTYLKDLAGISN
LKKPDPCPKMLPSISVNSDKISDVRCLLLGAGTLGCDVARILMDSGVRKLTVVDSGRVVV
SNLARQSLYTCDDRGAPKATAILRHLVERCPSVDAQGIQMEIPMPGHPVSPSEAAGVLQD
CKRLKELVASHDAIFLLTDTRESRWLPTLLCTNENKIAITAALGYDSYLVMRHGAGPGIS
YEASNVTTVMDKLSTKDSLGRERLGCYFCNDVVAPVDSVSNRTLDQQCTVTRPGLACIAS
GRAADLFTRMLHHPDGIHAPGEIAGASSGHPLGLLPHQIRGSLSQYNLLTLLGYSSSNCT
ACSNVVLSEYRSRGMDFVMQVINEPTYLEDLTGLTDLMKSAAYTEVEWVDETDEDDFAEI
NT seq
3063 nt
NT seq
+upstream
nt +downstream
nt
atggcgggggtcggtgcggcggggttcccgcggcagctgatggttgagtccatccccttc
ttggcggatgtggggttctgggatgcgctccgccgcctcaagctcgacgtcctggccacc
gacgactccccaatcccaatcaccggttattatgctccacgccggtttcgccaagcaagc
ttgttcaacctacgttcagaatcattggtgccaccttctcacaatccggttggcgacagg
aacagttgcccaatcctagggacccttataaacactaataacatgaggggattccaagac
ctagatagggaacttcttctgaaaacagaagcgaagaagatcttgcatgacattgtgtct
ggtaaagtagaagaggatcctgcactgctgcttaggttccttgtgatatcatttgctgat
ctaaagaattggaagatctattacaatgttgcattcccctcattggttttcaactcgacc
ctgctcagcctgcaagtcgcctcagaagtgctcagcaacgaagaggtagaatccttgaaa
atagcattgcaagagtggcgcgcttctactgaaacaacagttataccattctttctggtt
actatatcctcggattcctctgcctctataagacaacttaaggactggaaaacttgccag
gggaagtatcaaaagctgctatttggattttatgatcacggacgtcgcccagattgccct
ggctgggctattagaaactacattgcattcctgagtatccggtggaagattgagaaggtt
cagttcttctgctaccgtgaatttcagggaaaccctgatctagtacaatccctcattggc
gaagcatcatttccatcaccttctggctgggatgaccctgatcatgtacctgatgctttt
ggatgggaaggagtaaagccaggaaagggaacaaaagacatgaaaccaaaagaaatagat
attcaatcatcaaatccagcaagtcaggatgaagaaaaacaactgatgcacttaaagctt
atggggtggcgccactttcctgtgaatatagacaagttatctcaggttcgagttcttgtc
ctgggtgctggaactcttggatgtgaagttgctcgcctacttatgacctggggtgtacgg
aaattaactgtggttgacagtggtagtgttgccatgtctgaccttgtcaagcaatcactc
tacatagataaggactgtggagtcccaagagcaactgcaatagttccacatctaaaatca
agatgtcctgcagtggaggttgaaggcatccaaatggaaataccggtgcctgggcatcct
tattctcccagcaaaatggcaggtgtgcttgatgactgcaagcatctgcaaacattagtg
gctgccaatgatgcagttttcttgttaactgatacttgggagagcaggtggctcccaact
cttctctgtgcaagcgaaaacaagattgctattactgcagtattaggatgtgacagttac
atcgtcatgcgacatggtgctggtccaggaactagtgggggtacagatgaagtggctgct
cagatagaaaatttgtccacagaagatgctcttagccatcagagattgggctgttgtttc
tgcaatgatgctgcttccctttttaatacaattcctaatggaacactacctggacttacc
tcagttgcatctggcaaagcagtggagctctttgctaggatgttacatcatcctgacgag
ttacatgctccaggtgatattgctggtatggaaacagaacatcagcttggcctattacca
catcagctacaaggatcactcccaaagtgtgttttatccatggaacttggcaattcctca
ggcaactgtactgcatgttcgattgcagtattgtcagagtacagaagaaggggattggat
tttgtcatgcaggctattaactatccaacatatctgaaagatcttgcaggcatttctaat
ttgaagaagccagatccttgtcctaaaatgctgcccagcatctctgtaaattcagacaag
atttctgatgtccgctgtctacttttgggtgctggaactcttggatgtgatgttgctcgc
attcttatggactctggtgtacgaaagctaacagtggttgatagtggtcgtgtagttgtg
tcaaatttggcgagacaatcactctacacttgtgatgaccgtggtgccccaaaagcaact
gccatacttaggcatctagtggagaggtgtccttcagttgatgcacaaggcattcaaatg
gaaatacctatgccagggcatcctgtatctcccagtgaagcagctggtgtgctccaagat
tgcaagcgccttaaggaattagtggcttcccacgatgctatcttcttgttgaccgacaca
agggaaagtaggtggcttccaactctcctctgcactaatgaaaacaagattgctattact
gcagcgttagggtatgatagttaccttgttatgcgacatggggctggtcctggcataagc
tatgaagcttcaaatgtgactactgtcatggataagctgtccacaaaggattcccttgga
cgtgaaagactggggtgttatttctgcaatgacgtcgttgctcctgttgattctgtttca
aatcgaacactggatcaacaatgtacagtgacacgacccgggctggcctgtattgcatct
ggacgcgctgcagacctcttcacaagaatgttacatcatccagatgggatacatgctcca
ggagagattgctggtgcaagcagtggccatccacttggtctattacctcaccagatccgt
ggatcactctcacagtacaacttattaaccctcttgggctattcctcgagcaattgcaca
gcatgttccaatgtggtattgtctgaatatcggagtagaggaatggattttgtgatgcaa
gtgatcaacgaaccaacgtatttggaagacctcaccggcctcacggacttgatgaaatcc
gcagcttacactgaggtcgagtgggtagatgaaactgatgaagacgatttcgccgagatc
tga
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