Setaria viridis (green foxtail): 117856649
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Entry
117856649 CDS
T07951
Name
(RefSeq) probable 3-deoxy-D-manno-octulosonic acid transferase, mitochondrial
KO
K02527
3-deoxy-D-manno-octulosonic-acid transferase [EC:
2.4.99.12
2.4.99.13
2.4.99.14
2.4.99.15
]
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs00540
Lipopolysaccharide biosynthesis
svs01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
117856649
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
svs01005
]
117856649
Enzymes [BR:
svs01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.12 lipid IVA 3-deoxy-D-manno-octulosonic acid transferase
117856649
2.4.99.13 (Kdo)-lipid IVA 3-deoxy-D-manno-octulosonic acid transferase
117856649
2.4.99.14 (Kdo)2-lipid IVA (2-8) 3-deoxy-D-manno-octulosonic acid transferase
117856649
2.4.99.15 (Kdo)3-lipid IVA (2-4) 3-deoxy-D-manno-octulosonic acid transferase
117856649
Lipopolysaccharide biosynthesis proteins [BR:
svs01005
]
Lipid A
117856649
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Glycos_transf_N
Motif
Other DBs
NCBI-GeneID:
117856649
NCBI-ProteinID:
XP_034594890
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Position
5:complement(41194960..41200166)
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AA seq
453 aa
AA seq
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MPMRPARAPAPAAARGLYELYRAASRAAAPAVLLWRRLQGLEHPTRWPERLGRPSAARPR
PGSPLVWFHAVSLGEGMAALPVVRHCARLHPGLPVLLTTTTLSSFEVIKDLLPEGVIYQF
APLDCPDAIDSFIGYWKPSLVLLMESELWPNLIMSAAANGIAVALLNARMSLKSFNRWSV
PLGLPLVTLMLSKLSLVAPLSTIQAVRFQLLHTPPGIIHFAGDLKYAVGDVNAGENEVIK
IKDLQQQFSNRPLWMAASIHRGEEEVILRVHDELIKMYPTLLLILVPRHPQDCKDFSLVL
KKQKVNFVLRSTKEVVCSSTRVYMVDTLGELRMLYRVTPVAVVGGSFLPGLAGHNISEAA
AAGCAVMTGPHVGHFYHMLLEMWQINPLAVKQVGGEFELLHTLKELFGDAKTLGACQRAA
KDAFSIMSHGVVNRVWDLVCRFAIDLETDKWNS
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgccgatgcggccggcccgcgcgccggcaccggctgcggcgcgcgggctgtacgagctg
tacagggcggcgagccgcgcggcagcgccggcggttctcctgtggcggcggctgcaaggt
ctggagcacccgacgcggtggccggagcggctgggccggccgtcggcggcgcggcctcgc
ccgggatccccgctggtgtggttccacgccgtgtccctgggggagggaatggccgcgctc
cccgtcgtccgccactgcgcccgcctccatcccggcctccccgtgctcctcaccaccacc
actctctcctcatttgaagttatcaaggatttgcttcccgagggtgttatatatcagttt
gctcctctggactgtcctgatgcaatagacagttttattggatactggaagccaagtttg
gtccttcttatggaaagtgaactctggccaaacctcattatgtctgcagcagcaaatggg
attgcagtcgctcttttaaatgcccgcatgtcattgaagtcattcaaccgctggtccgtg
cctctagggttgccattagtcactctgatgctctctaaactatcacttgtggccccattg
agtactattcaggctgttcgttttcagctgctacacacacctccagggattatccatttt
gctggagatttaaaatatgctgttggtgatgttaatgctggggagaatgaggtcatcaaa
ataaaagatcttcagcagcagtttagcaatagacccctctggatggctgcttctattcac
agaggtgaagaggaagtcattctccgggttcatgatgagttaatcaagatgtatcccact
ctactactaattcttgtgcccagacatcctcaggactgcaaggatttttccttagtactg
aagaaacaaaaggtcaattttgtgctgaggtcgacaaaggaagtggtgtgttcaagcact
agggtatacatggttgatacattaggggaattaagaatgctttacagggtcacaccagtt
gctgtcgttggcggttcatttctacctggcctagctggccataatatttctgaggctgct
gctgctggttgtgctgttatgactggaccccatgttggacatttctaccacatgctgctt
gaaatgtggcaaataaatcctttagctgtcaagcaggtggggggagaattcgaacttctt
cacacactaaaagaactgtttggcgatgccaaaactctgggagcatgtcaaagagctgca
aaagatgcattttccattatgtcacatggagttgtgaaccgtgtatgggatttagtctgt
aggttcgccattgacttggaaacagataagtggaacagttga
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