Setaria viridis (green foxtail): 117856681
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Entry
117856681 CDS
T07951
Name
(RefSeq) LEC14B protein isoform X1
KO
K11801
DDB1- and CUL4-associated factor 11
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
svs04121
]
117856681
Ubiquitin system [BR:
svs04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
117856681
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
Beta-prop_EML_2
WD40
WD40_CDC20-Fz
WDR55
WD40_WDHD1_1st
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_TEP1_2nd
ANAPC4_WD40
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
Beta-prop_EML
Beta-prop_HPS5
Beta-prop_WDR19_1st
Cytochrom_D1
Beta-prop_EIPR1
PQQ
PROPPIN
WDR54
Beta-prop_DCAF4
Beta-prop_NUP159_NUP214
Motif
Other DBs
NCBI-GeneID:
117856681
NCBI-ProteinID:
XP_034594924
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Position
5:18406521..18417239
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AA seq
473 aa
AA seq
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MRWKRKIHHGGSSQQQLISPTLADEVCAIDKDVSHLSRIKSEPSQRTRAAIYAGQKRPIS
TFKLLSGRESNCSGMGRFSSADCSYALRKHLPVKGPWCVDDMDSEAYISQFSADGSLLIG
GFRGSHIRVYNSEKNWKVHKDITCKRLRWTVSDIALSPDQRFLAYSSLSPTVHIVNVQNA
VRESHANVTEIHEGLEFSDEDDGFSFGIFSVKFSKDGRELVVGNNNESICIYDLGANKVT
ERINAHAADVNVVTFADETSDVLYSGSDDSLCKVWDRRCHKKQKPVGVLTGHLDGITFID
SRGDGHYFISNCKDQTIKLWDLRKMSSTKKDCTPKAYEWDYRWMTYPSEARYLKHPYDQS
LATFRGHSVLRTLIRCYFSPMHSTGQRYIYTGSSDQCVYIYDVATGKVVEKLRWHGSIIR
DCSWHPYLPTLVSSSWDGYLVRWEATEDDRDPSMLKTGNKRMHPEGYTMSFVL
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgcgttggaaacgaaagatacatcatggaggatcatctcaacaacaactgatcagtcct
acacttgcggatgaagtatgtgccatagacaaggatgtctcccatcttagtagaattaaa
tctgaaccaagtcagagaactcgtgcagccatttatgctggccagaagaggcctatctca
acattcaagctattgtcagggagagaatccaattgctcagggatgggtaggttttcttca
gctgattgctcttatgctcttcggaaacacctaccagtgaaaggcccatggtgtgtggac
gacatggatagtgaagcatacatctcgcagttctctgcagatggttcactactaattggt
ggattccggggaagccacatcagagtctataattccgaaaaaaattggaaggttcataaa
gatataacctgcaagcgtctgcggtggacagtttcagatattgctctctcacctgatcaa
cgattcctagcttattccagtctgtcgcctactgttcacatagtaaatgtccagaatgct
gtaagagaatcacatgctaatgttacagaaattcatgagggtctggagttttctgacgaa
gatgacggattctcctttgggatattctctgtaaaattctcaaaagatgggcgagaactt
gttgtaggaaacaacaatgaatcaatatgtatttatgatcttggagcaaacaaagtaaca
gaacgcattaatgcacatgcggctgatgttaatgtggtcaccttcgctgatgaaacaagt
gatgtcttgtactctggaagtgatgatagcctctgtaaggtttgggataggcgctgccac
aagaaacaaaaaccagtaggtgttttgactggtcatttagatgggattacatttattgat
agccgtggagatgggcactattttatctcaaactgcaaggatcagactattaaattatgg
gatctcaggaaaatgtcctccactaagaaagattgcacaccaaaagcatatgaatgggat
tacagatggatgacatacccatcagaagcccgatatttgaaacatccatatgaccagtca
ctagccacattcagaggccattctgtgttgcgcacacttatccgttgttatttttcccca
atgcacagcacgggtcagagatacatatacacaggatccagtgaccaatgcgtctatatt
tatgatgtggcgacaggtaaggttgttgagaaactcagatggcacgggtcaatcatcaga
gactgctcatggcacccatacctcccaacgcttgtcagctcttcttgggacggctatttg
gtccggtgggaggcaacagaggacgacagagacccctccatgctcaaaacagggaacaag
aggatgcatccagagggatacacaatgtcgtttgtcctttag
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