KEGG   Setaria viridis (green foxtail): 117856681
Entry
117856681         CDS       T07951                                 
Name
(RefSeq) LEC14B protein isoform X1
  KO
K11801  DDB1- and CUL4-associated factor 11
Organism
svs  Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:svs00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:svs04121]
    117856681
Ubiquitin system [BR:svs04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     117856681
SSDB
Motif
Pfam: WD40_Prp19 Beta-prop_EML_2 WD40 WD40_CDC20-Fz WDR55 WD40_WDHD1_1st WD40_MABP1-WDR62_2nd EIF3I Beta-prop_TEP1_2nd ANAPC4_WD40 Beta-prop_RIG_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C Beta-prop_EML Beta-prop_HPS5 Beta-prop_WDR19_1st Cytochrom_D1 Beta-prop_EIPR1 PQQ PROPPIN WDR54 Beta-prop_DCAF4 Beta-prop_NUP159_NUP214
Other DBs
NCBI-GeneID: 117856681
NCBI-ProteinID: XP_034594924
LinkDB
Position
5:18406521..18417239
AA seq 473 aa
MRWKRKIHHGGSSQQQLISPTLADEVCAIDKDVSHLSRIKSEPSQRTRAAIYAGQKRPIS
TFKLLSGRESNCSGMGRFSSADCSYALRKHLPVKGPWCVDDMDSEAYISQFSADGSLLIG
GFRGSHIRVYNSEKNWKVHKDITCKRLRWTVSDIALSPDQRFLAYSSLSPTVHIVNVQNA
VRESHANVTEIHEGLEFSDEDDGFSFGIFSVKFSKDGRELVVGNNNESICIYDLGANKVT
ERINAHAADVNVVTFADETSDVLYSGSDDSLCKVWDRRCHKKQKPVGVLTGHLDGITFID
SRGDGHYFISNCKDQTIKLWDLRKMSSTKKDCTPKAYEWDYRWMTYPSEARYLKHPYDQS
LATFRGHSVLRTLIRCYFSPMHSTGQRYIYTGSSDQCVYIYDVATGKVVEKLRWHGSIIR
DCSWHPYLPTLVSSSWDGYLVRWEATEDDRDPSMLKTGNKRMHPEGYTMSFVL
NT seq 1422 nt   +upstreamnt  +downstreamnt
atgcgttggaaacgaaagatacatcatggaggatcatctcaacaacaactgatcagtcct
acacttgcggatgaagtatgtgccatagacaaggatgtctcccatcttagtagaattaaa
tctgaaccaagtcagagaactcgtgcagccatttatgctggccagaagaggcctatctca
acattcaagctattgtcagggagagaatccaattgctcagggatgggtaggttttcttca
gctgattgctcttatgctcttcggaaacacctaccagtgaaaggcccatggtgtgtggac
gacatggatagtgaagcatacatctcgcagttctctgcagatggttcactactaattggt
ggattccggggaagccacatcagagtctataattccgaaaaaaattggaaggttcataaa
gatataacctgcaagcgtctgcggtggacagtttcagatattgctctctcacctgatcaa
cgattcctagcttattccagtctgtcgcctactgttcacatagtaaatgtccagaatgct
gtaagagaatcacatgctaatgttacagaaattcatgagggtctggagttttctgacgaa
gatgacggattctcctttgggatattctctgtaaaattctcaaaagatgggcgagaactt
gttgtaggaaacaacaatgaatcaatatgtatttatgatcttggagcaaacaaagtaaca
gaacgcattaatgcacatgcggctgatgttaatgtggtcaccttcgctgatgaaacaagt
gatgtcttgtactctggaagtgatgatagcctctgtaaggtttgggataggcgctgccac
aagaaacaaaaaccagtaggtgttttgactggtcatttagatgggattacatttattgat
agccgtggagatgggcactattttatctcaaactgcaaggatcagactattaaattatgg
gatctcaggaaaatgtcctccactaagaaagattgcacaccaaaagcatatgaatgggat
tacagatggatgacatacccatcagaagcccgatatttgaaacatccatatgaccagtca
ctagccacattcagaggccattctgtgttgcgcacacttatccgttgttatttttcccca
atgcacagcacgggtcagagatacatatacacaggatccagtgaccaatgcgtctatatt
tatgatgtggcgacaggtaaggttgttgagaaactcagatggcacgggtcaatcatcaga
gactgctcatggcacccatacctcccaacgcttgtcagctcttcttgggacggctatttg
gtccggtgggaggcaacagaggacgacagagacccctccatgctcaaaacagggaacaag
aggatgcatccagagggatacacaatgtcgtttgtcctttag

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