KEGG   Setaria viridis (green foxtail): 117856737
Entry
117856737         CDS       T07951                                 
Name
(RefSeq) protein BREAST CANCER SUSCEPTIBILITY 2 homolog B
  KO
K08775  breast cancer 2 susceptibility protein
Organism
svs  Setaria viridis (green foxtail)
Pathway
svs03440  Homologous recombination
svs03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:svs00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    117856737
   03460 Fanconi anemia pathway
    117856737
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:svs04121]
    117856737
   03036 Chromosome and associated proteins [BR:svs03036]
    117856737
   03400 DNA repair and recombination proteins [BR:svs03400]
    117856737
Ubiquitin system [BR:svs04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   BRCC complex
    117856737
Chromosome and associated proteins [BR:svs03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Other centrosome duplication proteins
     117856737
DNA repair and recombination proteins [BR:svs03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    BRCA complex
     117856737
   FA (Fanconi anemia) pathway
    Downstream FA components
     117856737
SSDB
Motif
Pfam: BRCA2 BRCA-2_OB1 BRCA-2_helical BRCA-2_OB3
Other DBs
NCBI-GeneID: 117856737
NCBI-ProteinID: XP_034595002
LinkDB
Position
5:complement(8847466..8857994)
AA seq 1569 aa
MPSKWQVWGQPDGSLVWVPAPDAPPTPTPLHPSAPAVDAAAGPPDPAPPHPLPPDGAPIE
ETLGPDGADGRRLPCMTDLFFQALDKLIEGNGMDALTEGVSTGGLFSTGSGRSVAISGRA
VRRARVLIGDEVEEATNNNRKRKQPFGDDASLEGEQTSFDVLLAGGAHKDNLLPMFQTGS
GKVVSLSKDSIQKARAVLEENVESAAGARQPMFHTGTGRSVLVSKSSIDKARTVLEGQAV
ANEGDVGGPDGMEQFPMFQTGSGRAVSISMASVQKAKAVLDENNINTGNVEGPGRPDQSL
IFQTGSGRPVLISERSIERSRAALMDEGAENIGRWDTGCQLPIFQTGLGRSVAVKQSSIK
KARAVLEDGDVKRSGNGDTNVCATSFQFETPTSVLVSSSLIMNDRTVTPKENTSVQEKCY
KDDGHLPLFQTGSGRSVTVSKSSIKRASAILEPRNIAKELEDEAQLNDVCATSIIKTGLR
RSILSENPRENAQVVTGTKEAVKRVNSDVGDGFAENPMFQAGIQQFSPENVSSRHRAILL
EQGKFATKGYEDSGSSFPMFQTGSGKSVLVSESSVQKARAVLEEEGDANKENCKFDKMDK
KFPVFASPLKTICTRTVNVSSTGVSRAATLLGLEENTLSTQFFGHVGDKLGTKITVNREN
PEQRLDVVSAHAISGGPHKDFCPTESPILVDRHQQFGFSKTTSNAGERSIRFSTAGGRSM
AISTAALQRAKSLLGDSDLEVLPNEVCRSLASAKEKLPDSVISPKGDESNVLHRTKAIGY
AVPHTPVIKGTANKLGREYLPINEIPKVPKAPSRCLSEVDNAIDTKDKTQRHHMPAGPLV
DITNYMATCSGNTDNFANGKRIIGGRNSISPFKRPRSSRFVTPIKTNKLSSAGESKAASA
QISPCRTKLSACYPFQHQRKSCKEYFGGPPCFKYLTEHVTDDVKLMDAKRAEKFKFTHMG
AGAEDFQKMLLKCGASLSYATKEWVSNHYKWIVWKLASLERCYPTRAAGKFLTVDNVLEE
LKYRYDREVSHGHRSAVKRILEGNASPSLMMVLCISAIYSSPDQSNNKLEVDKVDNNEDS
NENKSLSAANRNMPAKIELTDGWYSLDASLDMALSEQLAKRKLFLGQKLRIWGASLCGWS
GPVSFHEASDTVKLMIHINGTYRARWNEILGFCNHVGLPLAFKCIKASGGRVPRTLVGIT
RIYPVLYRERLPDGRSIVRSERMERKALQLYHQRVSKITEDILFEQQENCDSTDDNDEGA
KICKMLERAAEPEVIMAGMTSEQLMHFSSYKEKQKVVMQNEVAKKVQKALEVSGLSSRDV
TPFLKVRVMGLVSKLSASTFSNKEGLITIWNPTEMQKADLVEGQIYSVTGLMPSNFCTNL
LYLHGRGSSTTWKPLASAQTTDFRPFFTPRKAIELSKFGEVPLSSEFDVAGVILYVGNIY
LCDNQKRQWLFLTDGSKFISEQMSEEQDCLLAVSFSSPTTGEDSALFSYTLSGNTVGFSN
LVKRQKDQMRQIWVAEATESSTYTLSHEIPRKSHLKEAAASAERWASRSCRKIEELKERV
LCIVGDSGG
NT seq 4710 nt   +upstreamnt  +downstreamnt
atgccgagcaagtggcaggtctggggccagcccgacggcagcctcgtctgggtccccgcg
cccgacgcgcctcccaccccgaccccgctacacccgtcggcgccggcggtggacgcggcg
gcgggtccgcctgatcctgcccctcctcatccgctgccgcccgacggcgcgccaatcgaa
gaaaccctaggcccggacggcgccgacggacgccgcctcccctgcatgaccgacctattc
ttccaagcgctggacaagctgattgaaggcaatggaatggatgcactgactgagggtgtc
agtacgggtggactgttctccactgggtcggggaggtcggtggctatcagcgggagggcc
gtaaggagggccagggtgttgatcggtgatgaggtggaggaggctactaacaataacagg
aagagaaagcaaccatttggtgatgatgctagtctagagggtgaacagacaagctttgat
gttctgttggcaggtggtgcacataaagataacttgttgccgatgttccaaactggatca
ggcaaagtagtctcactcagcaaggactcgattcagaaggcaagagctgttttagaagaa
aatgtcgagagtgctgctggtgccagacaaccaatgttccataccggtaccggtagatcg
gtcctagtcagcaagagctccattgataaggcgagaactgttttagagggtcaagcggtc
gcaaatgaaggagatgtaggaggcccggatggcatggaacagtttccaatgttccaaact
ggttcaggtagagctgtatcaatcagtatggcatctgtacagaaagctaaggctgtgcta
gatgaaaataatataaatacaggaaatgtggagggtcctggtaggcctgatcaatctctg
atatttcaaactggttccggaagaccagtcttgatcagtgaaagatccatcgagagatct
agggctgcgctgatggatgaaggtgctgaaaatattggacgatgggatactggctgccag
ctaccaattttccaaacaggactaggaaggtctgttgctgttaaacagagctcaattaaa
aaggcaagggcagttttggaggatggagatgttaaaagaagtggaaatggagataccaat
gtttgcgctacatctttccaatttgaaaccccaacgtctgtattagtgagtagcagtttg
attatgaacgacagaactgttacaccaaaggaaaatacttcagtgcaagaaaaatgttac
aaggatgatggccacttgcccttgtttcagactgggtcagggaggtcagttacagtaagt
aagagctcaattaaaagggcaagtgcaattctggagccaaggaacattgcaaaggaattg
gaagatgaagctcagctaaatgatgtttgtgccacctcaataattaaaactggacttaga
aggtctatcttaagcgagaacccaagagaaaatgcacaagttgtcacggggactaaagag
gctgtaaaaagagtaaatagtgacgttggagatggctttgctgaaaacccaatgttccag
gctggaatacaacagttttcacctgagaatgtaagttcaagacatagggccatcctcttg
gagcaaggaaaatttgcaacaaaaggatatgaagacagtggaagttcatttccaatgttt
caaactggatctggaaagtctgtcttggtcagtgaaagctcagtgcagaaggcaagggcg
gttttggaggaagaaggtgatgcaaacaaagagaactgcaagtttgataaaatggacaaa
aagtttcctgtctttgcttcacctctcaagacaatctgtacaagaacagtaaatgtatct
tcaactggtgtttctcgagctgctaccttattgggcttggaggaaaataccctttcaacg
cagttttttggacatgtgggtgataagttaggtacaaagataactgttaatcgggaaaat
ccagaacaaaggcttgatgttgtatctgcacatgcaatttctggtggccctcataaggat
ttttgtccaacagaaagccccatacttgtagatagacatcagcagttcggattttctaaa
actacctctaatgctggtgagcgttctatcaggttcagcactgctggtggccgatcaatg
gctatttctactgctgcactacaacgtgcaaaaagccttttgggtgattcagatttagag
gttttaccaaatgaagtatgtcgttctctggcatcagctaaagagaagctaccagactca
gttatttctccaaaaggagatgaatctaacgtattgcatagaactaaagcaattggatat
gctgtacctcatacccctgtaattaaaggaactgccaataagttggggagggaatatctt
ccaatcaacgaaattccaaaggtcccgaaggctccctccagatgtttatctgaagttgac
aatgcaattgacaccaaggacaagacccagaggcatcatatgccagccggaccattggtt
gacatcactaactacatggctacatgttccggaaatacggacaactttgctaatggaaag
agaataatcggaggaagaaactccatatctccattcaaacggccccgttcttccaggttc
gtcacgccaataaaaaccaacaaactgtcctctgctggagaatccaaagcagcgtcagct
cagatcagtccctgtaggacaaagctgtctgcatgttatcctttccaacatcaaaggaaa
agttgcaaagaatattttggtggtcctccttgcttcaaatatttgactgaacatgtaact
gatgacgtgaagctcatggatgcaaaaagagctgagaagtttaagtttacgcatatgggt
gctggggcagaagactttcagaagatgctgctcaaatgtggtgcttctttatcatatgca
actaaagaatgggtcagtaaccactataaatggattgtgtggaaacttgcttcactcgag
agatgctacccaactagagctgctggtaaattcttgacggttgacaatgttttggaggag
cttaagtaccggtatgacagagaagtgagccatggtcatcggtcagcagtaaaaagaatt
ttagaagggaatgcttcaccatctttgatgatggtcctgtgcatttcagctatttactct
agtcctgaccaaagtaacaataagttggaggttgacaaggtagataacaatgaagacagc
aatgagaataaaagcttgtcagcagctaatagaaacatgcctgcaaaaattgagttaact
gatggatggtattcactcgatgcatcgttagatatggcactttcagaacaactagcgaaa
agaaagcttttcttaggacagaagcttcggatatggggagcttctttatgtggttggtct
ggacctgtgtcatttcatgaggcatctgatactgtcaaattaatgatccacataaatggc
acctatcgtgcgagatggaatgagatcttgggattctgcaatcatgttgggctcccactg
gcattcaagtgcataaaagcttctggtggtagagttcctaggacactggttggaatcaca
aggatatatcctgttctctaccgggaaaggttgcctgatggtcgttctattgtgagatct
gaaaggatggaaagaaaggcgctgcaactgtaccaccagagagtatctaagatcacggaa
gatattctgtttgaacagcaagaaaactgtgacagtacagacgataatgacgaaggggct
aaaatttgcaaaatgctagagcgtgcagctgaacctgaagttataatggcaggcatgacc
tcagagcagttgatgcatttctcatcttataaagaaaaacagaaggtggttatgcaaaac
gaagtagctaagaaggttcaaaaggcccttgaagtttctggccttagttcaagagatgtt
acaccatttttgaaagtgagggtgatgggccttgtcagtaaactttctgcttcaacattc
agtaacaaggaagggttaataacaatttggaatcctactgagatgcagaaagccgatctt
gtggagggacaaatttattctgttacaggattgatgccttcaaacttttgtactaatctc
ctctacttgcacggtagaggatcttctacaacatggaagcccttagcatcagctcagact
acagattttagaccattcttcacccctcgtaaagcaatcgaactgtcgaagtttggtgag
gtgccgctttcaagtgaatttgacgttgcaggtgttattttatatgttggcaatatttat
ttatgtgacaaccagaaaaggcagtggctatttttaacagatggatctaaatttatctct
gaacaaatgtctgaagagcaagattgtcttctagcagttagtttttcttccccaaccact
ggcgaagactctgcattatttagttacaccctctctggaaacacagttggttttagtaat
ctggtcaagcgacagaaagaccagatgaggcaaatatgggtagctgaggcaacagagagc
tctacctacactctttcccatgaaattcctagaaaatctcacctaaaagaagctgcagct
tctgctgagagatgggcttcaagatcttgtcgtaaaattgaagagctaaaagaaagggtt
ttatgtatagttggtgacagtggtggctga

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