Setaria viridis (green foxtail): 117856796
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Entry
117856796 CDS
T07951
Name
(RefSeq) protein HASTY 1
KO
K14289
exportin-5
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117856796
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
svs03016
]
117856796
03036 Chromosome and associated proteins [BR:
svs03036
]
117856796
Transfer RNA biogenesis [BR:
svs03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
117856796
Chromosome and associated proteins [BR:
svs03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Other miRNA pathway proteins
117856796
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exportin-5
Xpo1
PV_NSP1
Motif
Other DBs
NCBI-GeneID:
117856796
NCBI-ProteinID:
XP_034595079
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All DBs
Position
5:complement(15699744..15713091)
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AA seq
1201 aa
AA seq
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MAADPAAAAAASAAAAISAVMDWRSTPDARAAAFAYLESVKSGDVRALASTSFLLVRKDQ
TSEIRLHGFKMLQHLVRLRWEELSASERNEFANLTINLISDVVGPDEVWALKSQTAALVA
EVVRREGVALWNTILPSIVSLSNCGPIEAELVAMILRWLPEDITVHNEDLEGDRRRSLLR
GLTESLPQILPLLYSLLEKHFVAALSEHSKQQMNLAKQHAGTVTAVLNAVNAYAEWAPVT
DLAKYGLIHGCGSLLSYSDFRLHACEFFKVICQRKRPVDVAVSEYDAAMCNIFQVLMNIS
QQFLTRPGMQPSSIDESEYEFATCVCETMVALGSSNMQCILADGARTFQFLQQMLEYYKH
YKIALHFQSLLFWLVVLREPSKAKSVARVSGDNFAAGNSASTGDLSTEKEKKGVSVFVTD
EIYSTILDVSFKRMLKNSGSASSGLLELWSEELEGKSDFCNYRTKLLDLIKVIASQRPVI
AAASIVQRINIVFGDANQATKSPQYLDAMEGAQLGLEAVVSAIFDGSVDCGKTDLEMKSQ
LHKIFEGLLQQLLSLKWTEPNLAVIHGHYLDALGPFLRHYPDAVASVVNKLFELLTSLPI
TFQDPSNNSRLARLQICSSFIRISRAADKALLPHMKNIADTMAYLQGEGRLLRGEHNHLC
EAFLVMASSAGIQQQQEVLAWLLEPLNKLWTQVEWQTAYLSDPTGLTNMFADSQFMWSIY
HTVTFFEKALKRSGTKKSTATPQAPTTTAAPGYLHPMSSHLAWILPPLLRLLRCIHALWA
EPFAQSQTGEIKAAKSMTVAEQASLLGETGKLTKGQVAPADGLLDVQRDGESKENNIKNW
LRGIRDSGYNVLGLAATLGEAFFRCAEASSVTLALMENVQVMEFRHLRQLIHLVIIPFVK
HCPADLWQVWLVNLLQPLVVHCQQALHYSWSSLLHEGRAKVPDNIGNLSGSELKVEVMEE
KLLRDLTREVCSVLWALASPGLNSGLPSLEQLGPSNRMDSLKNLESFASSSLTGFLMLHV
GTALPALRISVEVFSWTDSDAVTKVIPFCGALIHLAVASNQAELRQFVAKDLFSSIIQGL
SVESNSVMSAELVGLCREIYVYLSDRDPAPRQVLLSLPHIKQEDLLAFDDSLSKTASPKE
QKQHMRSLLLLATGNKLRALAAQKTTNVITNVTTRNRSSAAHHGSIAEEDGQIGLAALSS
T
NT seq
3606 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgaccccgccgctgcggccgctgcctcggcggcggctgcgatctccgccgtg
atggactggcgctccaccccagacgcccgcgccgccgccttcgcctacctcgaatcggtt
aagagcggagacgtccgagctttggcaagcacatcatttctcttggtacggaaggatcag
acatcagagatccgcttgcatgggttcaagatgttgcagcaccttgtgagattgaggtgg
gaggagctcagtgcttcagagcggaatgaatttgctaatttgaccattaatttgatatca
gatgttgttggccctgatgaggtgtgggccttgaagagtcagacagctgctttagtagca
gaggtagttagaagggagggagttgctttgtggaacaccatactcccatctattgtttct
ctctctaactgtggtcctatcgaggctgagttagttgccatgattctaaggtggcttcca
gaggatatcactgttcataatgaagatttggagggtgatagacggagatctctgttacgc
ggccttactgagtcactgccacaaattctgccactgttgtattccctacttgagaaacat
tttgttgctgctttaagtgagcactcgaagcagcaaatgaacttggctaaacaacatgca
gggacagtgacagcggttctaaatgctgtcaatgcatatgctgaatgggctcctgtgaca
gatctagccaaatatggtttaattcatggatgtggatccttgctttcttacagtgatttt
cgcctccatgcttgcgagttttttaaagtaatatgtcagagaaaaagacctgtggatgtt
gcagtttctgagtatgatgctgcaatgtgcaacattttccaggtgttgatgaacatttca
caacaatttttgaccagacctggcatgcagcctagttctattgatgaaagcgagtatgag
tttgcaacatgtgtttgtgagacaatggttgctctagggtcttctaacatgcaatgcata
ctagctgatggagctagaacttttcagttcttgcaacaaatgttggagtattacaaacat
tacaaaatcgcgcttcatttccagtctttattattttggctggtggtattgagagaacca
tcgaaagctaagtctgttgcgcgtgtttctggtgacaactttgctgctggtaattctgca
tccactggtgacttatcaacagaaaaggagaagaaaggggtatcagtatttgttactgat
gaaatatacagtacaatattggatgtttctttcaaaagaatgctcaagaacagtggaagt
gcatcttccgggttgttagaactatggagcgaagaacttgaggggaaaagtgacttctgc
aactaccgcaccaaattgttggatctaattaaagtcattgcttcgcaaagacctgtgatt
gctgcggcaagcatcgttcagagaataaatattgtttttggagatgctaatcaagcaact
aaatccccccagtatcttgatgctatggaaggggctcaactgggacttgaagcagttgtc
agtgctatatttgatggctcagttgattgtggaaagactgatttggagatgaaatcccaa
ctgcacaagatttttgaaggcttacttcagcagcttctttctttaaagtggacggaacct
aaccttgcggttattcatggtcattatttggatgctttgggtcctttcttgagacattat
ccagatgcagttgccagtgttgttaataagctttttgaactgttgacgtctctccccatc
acatttcaggatccatcaaacaattctcgcttagcaaggttacagatatgctcatcattc
attcgtatatctagagctgctgataaagcacttctgcctcacatgaagaacattgctgat
accatggcttaccttcaaggagagggtcgcttactacgtggtgaacataatcatctatgt
gaagcgtttcttgtgatggcatcctctgctgggattcaacagcaacaggaagtccttgcc
tggttacttgaacctctaaacaaactgtggactcaagtggaatggcaaactgcatactta
tctgaccctaccggtttgacaaacatgtttgctgatagccaatttatgtggtcaatttat
cacacagttacattctttgaaaaggccctgaagaggagtggaaccaaaaagtctaccgca
actccacaagcacccaccacaacagcagcacctggctatctgcatccaatgtcttcacat
ctagcatggattctgccccctctcttaaggctgctgcgatgcatacatgccctttgggct
gagccgtttgctcagtctcagacgggggaaatcaaagcagcaaaaagcatgactgttgcg
gagcaggctagccttctaggagagacaggtaaacttaccaaaggccaggttgctcctgct
gatggattgctggatgttcaaagagatggagaatctaaggaaaataacataaaaaactgg
ttgcgcgggatccgagacagcgggtacaatgttttaggattggcagctactcttggggaa
gcattctttcgatgtgcagaggcttcctccgtcacccttgctcttatggagaatgtgcaa
gttatggagtttcggcatttgcgccaacttatccaccttgttattattccatttgttaaa
cattgccctgctgatctatggcaagtgtggctagtgaaccttttgcagccattagttgtt
cactgtcagcaagctcttcactattcatggtccagtcttcttcatgagggccgggctaag
gttccagacaacattggtaatctttctgggtcagaactgaaggtagaggtcatggaagag
aagttgctacgtgacttgactcgcgaagtgtgttctgtgctttgggctttagcatcacca
ggcttgaatagtggacttccatccttggaacaacttggaccttccaaccggatggattct
ttaaagaatctggagtcttttgcttcaagttctctcactggatttcttatgcttcatgtt
ggcacagcccttcctgcattgaggatatcagttgaagtgttcagttggacagatagtgat
gctgtgactaaagttatccccttttgtggtgcacttattcacctcgctgttgcttcaaac
caggctgagttgaggcagtttgttgcaaaggatttattttcttctataatacagggttta
tctgttgaatcaaattcagtcatgagcgctgaacttgttgggctttgtcgggagatatat
gtctatctgtctgatagagatcctgcacctaggcaggttcttctttccctcccacacatc
aagcaggaagatttgctagcgtttgatgactcgttgagtaaaactgctagtcctaaagag
caaaagcaacatatgcgaagcttacttctgctggctacagggaacaaattaagagctctt
gctgctcagaaaacaactaatgtgattactaatgttacaactcgaaataggagctctgct
gcacaccatggatcaattgccgaagaagatggccaaattggattggccgcactatcatca
acatga
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