KEGG   Setaria viridis (green foxtail): 117856844
Entry
117856844         CDS       T07951                                 
Name
(RefSeq) la-related protein 1A
  KO
K18757  la-related protein 1
Organism
svs  Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:svs00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:svs03019]
    117856844
Messenger RNA biogenesis [BR:svs03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     117856844
SSDB
Motif
Pfam: LARP1_HEAT La
Other DBs
NCBI-GeneID: 117856844
NCBI-ProteinID: XP_034595161
LinkDB
Position
5:complement(3896491..3906205)
AA seq 939 aa
MEEPNVGGGAAAADPAGGGAAVGAGASPWRKTTPPPAAGEAAVMGAESWPALEEARQKVA
PESPAKAGAGNAVGGDLAKGPQGSPPPPPPSQVASRAHKFDGHGNPNRNHQAHHKNGPKR
RFPAVNGAPSYPPAMQYHQHPGQPIFYPVPVLPSPMMLQEYPYQPFPVSVPNHERHVGKS
GYENSVPPFVPVDQVGANEGNRPMPPHPRGDSHAWRPPVGTHGARPHPGPEGHGHFSQTW
QNPQMFGTRENTNLPQGVGPRAFVRPMVPPPLGYINGPPYPGPMHPMYYYMPAPMEPMRG
PQRYIQNQPTPSPVLSPKAAELRSKILTQVEYYFSDTNLERDDFLKSLMDENGWVPVSKV
ADFNRLKKMTTDIHLIVDALANSSLLEVQDDKIRRRSDWAKWASFSGATSVASPSSASMD
SRGERNIGGFSNKDDDSEDQKKHSQSKDIKCNTDYINTEEKVADEQVQDAHIYSLNRDLS
AISIDEKPKSLAAQSIKSSKHYSSFRSGDVKVQKVKSKINAPDSQNDFSSFGGDQSTFML
DEELELEHADHSRDDLYSHKRGDDEEEDFFVDDQDVNRLIIVTQDTGLAKDDKSRTSMPQ
AFSTEEASRISDALYHYETLHGRRANNHRGSQADTADVDSKPTGGSKGNHIGCGPNGTEE
TGQPIPRKRQSRGNRKAQSARKQRFFAGNFMSNPDQYGGVSESPPGHSVGYFYGSTPENH
SYKSSKLSSSPHGIPTGSSPVGSIPKSSPQSQHLNYHLLEKNKLQQQRYNKFKHHCLVER
KKLGTGHSEQMNSLYRFWSYYLRDNFNEDMYTHFKKFALEDAAASYRYGLECLFRFYSYG
LEKNFQPNVYEDFEKLTLEFYQNGDLYGLEKYWAFHHYRNPDSGPVNKLPELERLLREEF
RTLDDFKAKEKAHDATEKETGCSSSTVAVTASHSKAETK
NT seq 2820 nt   +upstreamnt  +downstreamnt
atggaggagccgaatgtgggcggaggtgccgcggcggcggatccagctggtggcggcgcc
gcagtcggggctggcgcatcgccctggaggaagaccacgccgccgccggcggctggcgag
gcggcggtcatgggggccgagtcctggcccgcgctggaggaggcgaggcagaaggtcgcc
ccggagtcccccgcgaaggcaggggcgggcaatgctgttggtggggacttggccaaggga
ccgcaggggtcccctcctcctccgcctccatcccaggtggctagtcgtgcgcacaagttt
gatggccatggaaatcccaacagaaatcaccaagcacaccataaaaatgggcccaagcgg
cgttttcctgctgtgaatggtgcaccatcctaccctccagcgatgcagtatcaccaacat
ccagggcaacctattttttaccctgtccctgtgcttcccagtccaatgatgctacaagaa
tatccttaccagccatttcctgtttcagtcccgaatcatgagaggcatgttggaaaatcc
gggtatgagaactccgtgcctccttttgttccagtagatcaagttggtgcgaatgaaggt
aacaggccaatgcctccccatccaagaggagattctcatgcctggcggcctcctgttggt
actcatggtgctaggccccatcctggtcctgaaggtcatggccattttagtcagacttgg
caaaatcctcagatgtttggtacaagagagaacacaaatctaccacaaggtgttgggcca
agagcttttgtcagaccaatggtgcctcctcctcttgggtacatcaatggaccaccatat
cctggacctatgcatcccatgtactattacatgcctgcacctatggaaccgatgagaggt
ccacagcgctacatccaaaatcaaccaacgcctagtcctgttttatcccctaaagctgct
gagttaagatctaagatactaactcaggtggagtactacttcagtgatacaaatctggag
cgtgatgatttcctgaaatctttaatggatgagaatggctgggttccagtttcaaaagtt
gcagatttcaataggcttaagaaaatgaccacagatatacacctgattgtagatgcattg
gcaaactcaagtcttcttgaagtccaggacgacaaaattagaaggcgttctgactgggca
aagtgggcctctttttctggtgcaacatctgttgcaagcccatcatctgcaagtatggat
agcaggggtgagagaaatatcggtggcttttcaaataaggatgatgattctgaagatcaa
aagaagcattctcagtctaaagatattaaatgtaatacagattatattaatacggaagaa
aaagttgctgatgaacaagtccaagatgcacatatctattcattgaatagggacttatct
gccattagtattgatgaaaagcctaagagtcttgctgcacagtctataaagtcaagcaaa
cattattcttcttttagatctggtgatgttaaagttcagaaagtgaagtcaaagataaac
gcacctgattctcaaaatgacttctctagctttggtggtgaccaaagcactttcatgctt
gatgaggaattggaattggaacatgcggaccattcacgcgatgacctctattctcataaa
aggggtgatgacgaggaagaggacttttttgttgatgaccaagatgttaataggctaata
attgtcacacaggatactgggttagcaaaggatgacaaaagccgcacaagtatgcctcag
gcattttcaacagaggaagcatcgagaataagcgatgccttataccattatgagacactt
catggtcggcgcgctaataatcatagaggttcccaggctgatactgcagatgttgattct
aaaccaactggtggttcaaaggggaaccacattggctgtggacctaatggtactgaagaa
actgggcagcctattccacgcaagcgccaaagtagaggcaatagaaaagcacaaagcgca
cggaaacagcggttctttgctggtaatttcatgagtaatcctgaccaatatggtggtgta
tcagaaagccctccgggccattcagttggatatttctacggatctactccagaaaatcac
agctataagagttcgaagctgagttcttctcctcatggaattcctactgggagctcacct
gttggatctatacccaaatcttctccacaatctcagcatctaaattatcatcttttagaa
aaaaataaactccagcagcagaggtacaataagttcaaacatcactgccttgtggaacgt
aagaaactaggcaccggtcacagtgagcaaatgaactcgctgtatcgcttttggtcatac
tatctcagagataattttaatgaagacatgtatacgcattttaagaaattcgcactagag
gatgcagcagcaagctacagatatggactcgagtgccttttcaggttttatagttatggt
ttagagaaaaacttccaacctaatgtatatgaagatttcgagaagcttacgcttgaattc
taccaaaatggtgatctttatggacttgaaaaatactgggcatttcaccattaccgaaat
ccagatagcggtcctgtaaataagcttccagagctggagaggcttctcagggaggagttc
cggaccctggatgacttcaaggcgaaggagaaggcccatgatgccacagagaaagagacg
ggctgcagtagcagcaccgtggcggtgaccgcaagccatagcaaggctgagactaagtag

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