Setaria viridis (green foxtail): 117856847
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Entry
117856847 CDS
T07951
Name
(RefSeq) transketolase, chloroplastic
KO
K00615
transketolase [EC:
2.2.1.1
]
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs00030
Pentose phosphate pathway
svs00710
Carbon fixation by Calvin cycle
svs01100
Metabolic pathways
svs01110
Biosynthesis of secondary metabolites
svs01200
Carbon metabolism
svs01230
Biosynthesis of amino acids
Module
svs_M00004
Pentose phosphate pathway (Pentose phosphate cycle)
svs_M00007
Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P
svs_M00165
Reductive pentose phosphate cycle (Calvin cycle)
svs_M00611
Oxygenic photosynthesis in plants and cyanobacteria
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00030 Pentose phosphate pathway
117856847
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
117856847
09109 Metabolism of terpenoids and polyketides
01051 Biosynthesis of ansamycins
117856847
Enzymes [BR:
svs01000
]
2. Transferases
2.2 Transferring aldehyde or ketonic groups
2.2.1 Transketolases and transaldolases
2.2.1.1 transketolase
117856847
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transketolase_N
Transket_pyr
Transketolase_C_1
Transketolase_C
E1_dh
KfrA_N
DUF498
Motif
Other DBs
NCBI-GeneID:
117856847
NCBI-ProteinID:
XP_034595166
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Position
5:complement(40732605..40736425)
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AA seq
719 aa
AA seq
DB search
MAAPTPTTSAAAAPGSGRGVVRLLRSSAGSRLPFAAAVRPGGRPATALRARAPPAAPKLV
EQSVNTIRFLAVDAVEKAQSGHPGLPMGCAPLGHVLFDEFLRFNPKNPAWFDRDRFVLSA
GHGCMLQYALLHLAGYDSVTMDDLKAFRQWRSRTPGHPENFETPGVEVTTGPLGQGFANA
VGLALAEKHLAARFNKTDLNIVDHYTYVILGDGCQMEGVSNEAASLAGHWGLGKLIAFYD
DNHISIDGNTDIAFTENVSARYEALGWHTIWVKNGNTGYDDIRAAIKEAKRVKDKPTLIK
VTTTIGFGSPNKANTYSVHGSALGSKEVEATRSNLQWFHEPFHVPDEVKRHWSHHIDEGA
SLEAEWNAKFAEYEKKYHQEAAELKSIISGELPSRWDNALPTYTPESSPDATRNLSQQCL
NSLAKVIPGFLGGSADLATSNMTLLKMFGDFQRDTPEERNIRFGVREHGMGAISNGIAVH
SPGLIPYCATFFVFTDYMRAAIRLSALSESGVIFVMTHDSIGLGEDGPTHQPVEQLFSLR
AMPNILMLRPADGNETSGAYKVAVLNRKRPSVIALSRQKLPQLKGTSVDSVSKGGYIISD
NSSDNKPDLIVIGTGSELEIAEKAADELRKEGRTVRVVSLVCWELFEEQPEKYKESVLPS
EVTSRISIEAGVTFGWEKYIGQKGKAIGIDSFGISAPAGKIFKELGLTVENVIAAAKAL
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atggcagcaccaacccccaccacctccgccgccgcagcgcccggctccggccgcggcgtc
gtccgcctcctccgctcttccgccggctcccgccttccattcgccgctgcagtcaggccc
ggcggccgaccggccaccgcgctccgcgccagggccccgccagcggcgcccaagctggtg
gagcagtcggtgaacacgatccggttcttggcggtggacgccgtggagaaggcgcagtcg
ggccacccgggcctccccatggggtgcgcgccgctgggccacgtcctgttcgacgagttc
ctccgcttcaacccgaagaaccctgcctggttcgaccgcgaccgcttcgtgctctccgcg
ggccatgggtgcatgctccagtacgcgctgctccacctcgccgggtacgacagcgtcacg
atggatgacctgaaagcttttcgacagtggagaagcagaactcctggccatccagagaat
ttcgaaacacctggagttgaagtcaccaccggtcctctgggacagggtttcgcaaatgct
gttggactagcacttgcagagaaacatcttgctgctcgtttcaacaagactgatttgaac
atcgtggaccactacacgtatgtaatccttggggatggttgccaaatggaaggtgtttca
aatgaagcggcctctctagctggtcactggggccttggaaaattgattgctttctatgat
gacaaccatatatcaattgatggtaatacagatattgctttcaccgaaaatgtgtctgcc
agatatgaggcactaggatggcatactatctgggtgaagaatggcaacacggggtatgat
gacattcgtgctgcaatcaaggaagcaaagagggttaaagataagccaactcttatcaag
gtgactaccacaattggttttggatctccgaacaaggcgaacacttatagtgttcatgga
agtgctttaggatccaaggaagtagaggctactagaagcaatcttcagtggtttcatgag
cctttccatgttccagatgaggtgaagaggcactggagtcaccatattgatgagggtgct
tcgcttgaagctgaatggaatgcaaagtttgcagaatatgaaaagaaataccaccaggag
gctgctgagttaaagagcataatttcaggggaactgccttcaaggtgggacaatgctctt
ccaacctatactcctgaaagctctcctgatgctactaggaacttatctcaacagtgtttg
aattcacttgcgaaagtaatacctggatttcttggaggtagtgctgatcttgcaacatca
aatatgacattgcttaagatgtttggtgacttccagagggatacacctgaagagagaaac
attcgttttggtgtgagagagcatggaatgggtgccatttctaatggcatcgcagttcat
agccctggcctgataccttattgtgctacattctttgtgttcactgactatatgagagcg
gccatccgcctttctgccctaagtgaatctggagtgatctttgtgatgactcatgactcc
attggccttggagaagatggaccaacccatcagcctgttgagcagttgttcagccttcga
gcaatgcctaacattttaatgctccggcctgctgatggaaatgagacatctggggcttac
aaggttgcagttcttaataggaaaaggccctctgtcattgccctctcacgacagaagctt
ccacagctgaaaggaacatcggttgattctgtttctaaaggaggatatattatttccgat
aactcatcagacaacaaaccagatctcattgtcattggcactggctccgagcttgagatt
gcagaaaaagctgcagatgagctgaggaaagaggggaggactgtacgagttgtttcactt
gtttgctgggaattgtttgaagagcagcctgagaagtacaaggaaagtgttcttccaagt
gaggttacttctaggattagcattgaggctggggtcacatttggatgggagaagtatatc
ggacagaaaggcaaagctattggcatcgacagtttcggtataagtgctcctgctgggaaa
atattcaaggaacttggtttgacagtggaaaatgtcattgcagcagccaaggccctgtga
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