Setaria viridis (green foxtail): 117856907
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Entry
117856907 CDS
T07951
Name
(RefSeq) SKP1-like protein 11
KO
K03094
S-phase kinase-associated protein 1
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs03083
Polycomb repressive complex
svs04120
Ubiquitin mediated proteolysis
svs04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
117856907
04120 Ubiquitin mediated proteolysis
117856907
09126 Chromosome
03083 Polycomb repressive complex
117856907
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
svs04131
]
117856907
04121 Ubiquitin system [BR:
svs04121
]
117856907
03036 Chromosome and associated proteins [BR:
svs03036
]
117856907
Membrane trafficking [BR:
svs04131
]
Endosome - Lysosome transport
Acidification regulators
RAVE complex
117856907
Ubiquitin system [BR:
svs04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Adaptor protein
117856907
Cul7 complex
117856907
Chromosome and associated proteins [BR:
svs03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
117856907
Centromeric chromatin formation proteins
Kinetochore proteins
CBF3 complex
117856907
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Skp1
Skp1_POZ
Motif
Other DBs
NCBI-GeneID:
117856907
NCBI-ProteinID:
XP_034595236
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All DBs
Position
1:40785731..40786830
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AA seq
233 aa
AA seq
DB search
MAAAEGEKKGAMEAEKGEKEAMAAAKGAPVEEKGKGAEAPEEEGTGEAAVEKGKAVAEAE
EAAGAKMITLRSADGEERSMSAAAAKLSVVLSNMIEDDCAYNVVIPLERSATVARTLDTV
IEYCVKHADEPVHDSNPSTAGGSSSVVVTAVPEDLEEWDRKLVEGLSADDLYDLLLAANH
LSIQGLIDVVCQRAADMIKGKTTQQIRDTFNLPNDLTPADEAKLRQQRAWVID
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcggagggagagaagaagggagcgatggaggcggagaagggagagaaggaa
gcgatggcggcggcgaagggagcgccggtggaggagaagggaaagggagcggaggcgccc
gaggaggaggggacgggagaggcggcggtggagaaggggaaggcagtggcggaagcggag
gaggcggccggcgcgaagatgatcaccctgcggagcgcggacggggaggagcgttccatg
tcggcggcggcggcgaagctgtcagtggtcctcagcaacatgatcgaggacgactgcgcg
tacaacgtcgtcatcccgctcgaacgctccgccaccgtcgcgaggactctggacacggtg
atcgagtactgcgtcaagcacgccgacgagcccgtccacgactccaaccccagcaccgcg
ggcggcagcagcagcgtcgtcgtcacagcggtgcccgaggacctggaggagtgggaccgc
aagctcgtcgagggcctcagcgcggacgacctgtacgacctcctcctcgccgccaaccac
ctcagcatccaggggctcatcgacgtcgtctgccagagggccgccgacatgatcaagggc
aagaccacccagcagatccgcgacaccttcaacctccccaacgacctcaccccggcggac
gaggcgaagttgcgccagcagcgcgcctgggtcatcgactag
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