KEGG   Setaria viridis (green foxtail): 117856907
Entry
117856907         CDS       T07951                                 
Name
(RefSeq) SKP1-like protein 11
  KO
K03094  S-phase kinase-associated protein 1
Organism
svs  Setaria viridis (green foxtail)
Pathway
svs03083  Polycomb repressive complex
svs04120  Ubiquitin mediated proteolysis
svs04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:svs00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    117856907
   04120 Ubiquitin mediated proteolysis
    117856907
  09126 Chromosome
   03083 Polycomb repressive complex
    117856907
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:svs04131]
    117856907
   04121 Ubiquitin system [BR:svs04121]
    117856907
   03036 Chromosome and associated proteins [BR:svs03036]
    117856907
Membrane trafficking [BR:svs04131]
 Endosome - Lysosome transport
  Acidification regulators
   RAVE complex
    117856907
Ubiquitin system [BR:svs04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Adaptor protein
     117856907
   Cul7 complex
     117856907
Chromosome and associated proteins [BR:svs03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     117856907
  Centromeric chromatin formation proteins
   Kinetochore proteins
    CBF3 complex
     117856907
SSDB
Motif
Pfam: Skp1 Skp1_POZ
Other DBs
NCBI-GeneID: 117856907
NCBI-ProteinID: XP_034595236
LinkDB
Position
1:40785731..40786830
AA seq 233 aa
MAAAEGEKKGAMEAEKGEKEAMAAAKGAPVEEKGKGAEAPEEEGTGEAAVEKGKAVAEAE
EAAGAKMITLRSADGEERSMSAAAAKLSVVLSNMIEDDCAYNVVIPLERSATVARTLDTV
IEYCVKHADEPVHDSNPSTAGGSSSVVVTAVPEDLEEWDRKLVEGLSADDLYDLLLAANH
LSIQGLIDVVCQRAADMIKGKTTQQIRDTFNLPNDLTPADEAKLRQQRAWVID
NT seq 702 nt   +upstreamnt  +downstreamnt
atggcggcggcggagggagagaagaagggagcgatggaggcggagaagggagagaaggaa
gcgatggcggcggcgaagggagcgccggtggaggagaagggaaagggagcggaggcgccc
gaggaggaggggacgggagaggcggcggtggagaaggggaaggcagtggcggaagcggag
gaggcggccggcgcgaagatgatcaccctgcggagcgcggacggggaggagcgttccatg
tcggcggcggcggcgaagctgtcagtggtcctcagcaacatgatcgaggacgactgcgcg
tacaacgtcgtcatcccgctcgaacgctccgccaccgtcgcgaggactctggacacggtg
atcgagtactgcgtcaagcacgccgacgagcccgtccacgactccaaccccagcaccgcg
ggcggcagcagcagcgtcgtcgtcacagcggtgcccgaggacctggaggagtgggaccgc
aagctcgtcgagggcctcagcgcggacgacctgtacgacctcctcctcgccgccaaccac
ctcagcatccaggggctcatcgacgtcgtctgccagagggccgccgacatgatcaagggc
aagaccacccagcagatccgcgacaccttcaacctccccaacgacctcaccccggcggac
gaggcgaagttgcgccagcagcgcgcctgggtcatcgactag

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