Setaria viridis (green foxtail): 117856911
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Entry
117856911 CDS
T07951
Name
(RefSeq) polypyrimidine tract-binding protein homolog 1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
svs03041
]
117856911
Spliceosome [BR:
svs03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
117856911
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_8
Motif
Other DBs
NCBI-GeneID:
117856911
NCBI-ProteinID:
XP_034595237
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All DBs
Position
5:complement(29049911..29055149)
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AA seq
561 aa
AA seq
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MASGGQPQFRYTQPPSKVLHLRNLPWDCTPEELVELGTPFGKVVNTKCGVGANRNQAFIE
FADQNQAIAMISYYASSAEPAQVRGKNVYLQYSNRQEIVNTKTTGEGSGNVLLVGMEGVA
PDSVSIDVLHVVFSAFGFVHKIATFEKASGYQALIQFSDAETATSAKAALDGRCIPSYLL
PELDGACTLRISYSAHSVLNVKYQSHRSRDFTNPYLPFLDSAKDGSGADGRKQEPDSNIL
LASIENMQYVVTIDVLHEVFSAFGFVQKIAIFEKNGFQALIQYPDIQTAVAAKEALEGHS
IYEGGYCKLHLAFSRHTELNVKVNNERGRDYTKGNVTTSSDQPSILGPQPIPNVGAVIPP
PPHTSVPSAATSSVMPPGVHTPAMPGEASALPSHPTSEPHSQTAVVPSGGPSQYPGQAIL
PGPPGVPQQFPGYGSAQAPMLQPSGQGSQQMSNHVNYQLPPGSAQFMQYLGNGSHLVPNT
HGPQAVPFPGLGAQQLPPGPQMMQAPGYGGLPFSQGPRQPMPQFPMYGNQQFPPGMEPQM
MPFSEPGGRQLPFAPRGPYSR
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atggcttccggtgggcagccgcagttccgttacacgcagccgccgtcgaaggtgctccac
ctgcggaacctgccgtgggactgcaccccggaggagttggtcgagctggggacccccttc
ggcaaggtcgtcaacaccaagtgcggcgttggcgccaaccgcaaccaggcattcatcgaa
ttcgctgaccaaaatcaagcgattgccatgatatcatattatgcatcgtcagcagagcca
gcgcaggtaagagggaaaaatgtgtaccttcagtactccaatagacaggagatagtcaac
acgaagactactggggaaggttcaggcaacgttttgcttgtgggaatggagggtgtcgcg
ccagattctgtcagcatcgatgttctacatgtggtattttctgcctttgggtttgttcac
aagattgctacctttgagaaggcatctggttatcaggcgttaattcagttttctgatgct
gaaaccgcaacatccgcaaaagctgcgctcgatggtagatgcattcctagctatttgcta
ccagaactggatggggcctgcactttgagaataagctattcagcacacagtgttctcaat
gtcaagtatcagagccacaggagtagggacttcactaacccttaccttccttttctggat
tctgctaaagatggctctggagcggatgggagaaagcaggaaccagatagcaatatactt
cttgcatccattgagaacatgcagtatgttgttacaattgatgtgcttcatgaggtcttt
tctgcttttggatttgtacaaaagattgcaatttttgagaagaatggctttcaagcattg
atccagtatccagacattcaaactgcagttgcagcaaaagaagcattagaagggcacagc
atctatgaaggtggatactgcaagcttcaccttgcattttcacgacatactgagcttaat
gttaaggttaacaatgagcgaggtagagattataccaaaggaaatgttactacaagcagc
gatcaaccttccattcttggtcctcagccaataccaaatgttggtgctgtcattccacca
ccaccacacactagtgttccttctgcagccaccagttcagtaatgccaccaggggtgcat
actccagcaatgccaggagaagcatctgctctaccttcccatcctacaagtgagccacac
tcgcaaactgctgtcgttccctcaggtggaccttcacagtaccctggccaggcaatcctc
ccaggccctcctggtgttcctcaacagttcccaggttatggctcggctcaagctccaatg
ctgcagccttcaggtcagggaagtcaacagatgtccaaccatgtgaactatcagctgcct
ccaggttcagcccagttcatgcagtatcttggcaatggaagccatctggttccaaacaca
catggcccacaagcagtgccgttccctggcctcggtgcgcagcagctacctccaggtccc
cagatgatgcaagctccaggttatggaggcctaccgttttcacaaggtccacggcaacca
atgccgcagttcccgatgtatggcaaccagcagttccctccgggtatggagccccagatg
atgccattctctgagccgggaggccggcagcttccatttgctccacggggtccctatagt
cgttag
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