Setaria viridis (green foxtail): 117856927
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Entry
117856927 CDS
T07951
Name
(RefSeq) protein STICHEL
Organism
svs
Setaria viridis (green foxtail)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DnaA_N-like_STI
AAA
DNAX_ATPase_lid
DNA_pol3_gamma3
RCF1-5-like_lid
AAA_22
RuvB_N
AAA_5
AAA_16
AAA_18
AAA_30
ResIII
AAA_24
Motif
Other DBs
NCBI-GeneID:
117856927
NCBI-ProteinID:
XP_034595267
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Position
5:complement(37862662..37871624)
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AA seq
1175 aa
AA seq
DB search
MATMVEGCVGPSELHLKKELIALRKARFLRDPETCSSWRSPLSSKSFLTTSGVTHHIEIG
SSLSQQHTEPAAAPPKSEKKRKNVYLYNWRHHSNKSSESGIKLDVDDKQASADCSLESPC
ISNGVDSRSDTCLEVPVSIYSVQGSNSCTPVKRTVRRVRRSSFSKKGAMRNSTVSKLLDL
HVNSGEQSEDTENYNSENHEQLQKAGYFSRSTSPLFAASGCFSSSNPSKLLRVPRREGSS
FSCTPVSTSSYYRYKGRNPSTVGSWDGTTAASLDDDGLNQPELLTSRCGIPCYWSKRSKQ
KGSERSCSPSLSDTLRRKGSSLLCGSQTMHRRKKSSGSNKYGYLNKSSQGVPLLGDSSHF
AYSSFDSASDEVSTIFGELDLEALSRLDGRRWSSCKSQDGIALSVSGADHVVPDHRSLSQ
KYRPRSFLEIVGQNFVVQSLSNAITRERIAPAYLFHGPRGTGKTSAARIFSAALSCTATG
EAKPCGICTECNDFFTGNGINLIEVDATNRKGINRVRHLIENIPASATSSRYKVFVVDEC
HMVSSKVWSAFMKFLDEPLPRVVFIFITIDPENLPRSVISRCQKYMFAKIKDIDIVCRLR
KIAMKENLDVELAALDLIALNSDGSLRDAETMLDQLCLLGKKITPSLVNDLVGVVSEEKL
LDLLEIAMSSDTAETVKRSRELMDSGVDPTALMSQLAGLIMDIIAGTYRLADPTCGGDGI
GGRNITDAELERLQQALRILSDAEKQIRLSSERSTWFTAALLQLGSGHNSEITQSRSSSK
QSAKATSETMMEAVRESSASRTTSHPLFAFRDSKKALDLKTTSGHSSPQGPSLSSRMKPN
DNFIYGECRSVDRALLDSAQTSIPSEQRNTNSGISDNLTRIWMKCIENCHSKTLRQLLYD
HGKLASVKECEGTIITFVAFEDNDIKFRAQRFVSSIRNSMETVLKCNVEVRICLMQEFLA
GGLQHQVYPDETGESDVLSCSTNSERLKGVLNPSGAGGGLQSSNVPMIISEGNSGIHRTR
GQEVAVEQLKTAALDEQRLESAWLQTAEKHTPGTLNQARPERNQVLPQTVGQHHGRPSMA
TIVPSRHADKDLTNELKALKISDSHGSQKYQNVQTENGYAISPSLLHRNNHLANCDNESV
VSESGAPGCHGLFPCWKTEKTKRRKGKGQTRLRSS
NT seq
3528 nt
NT seq
+upstream
nt +downstream
nt
atggcaactatggttgaagggtgtgttggtccaagtgagcttcacctgaagaaggaactt
attgccttgagaaaggcacgtttcttgcgtgatcctgaaacatgctcatcctggaggtca
ccattaagttctaaatcattcttaacaacttctggagttacgcatcacattgagattggc
agtagtttgtcacaacagcacacagagccagctgctgcacctcccaaaagtgaaaagaaa
aggaaaaatgtttatctatacaactggaggcatcattctaacaaatccagcgaaagtggg
ataaagttagatgtggatgataagcaagcttccgcagactgtagcctggaaagcccatgc
atttctaatggtgtggactcaaggagtgacacatgtctggaagttcctgtcagcatatac
agtgttcaaggctcgaattcgtgcactcctgttaaaagaactgttagaagggtgagaagg
agttcattttcaaagaaaggagctatgagaaattcaaccgtttcaaagttgctagatctc
catgtgaactcaggtgagcagtctgaggatactgagaattacaactctgagaatcacgag
cagcttcagaaggcaggctatttttctcgctctacatcaccactatttgctgcatcggga
tgttttagctcatcgaatccctcaaagctgttgagagtgccaagaagagaaggatcttcc
ttttcttgcactccggtctcgactagctcctattacaggtacaaagggaggaatcctagt
actgtaggttcatgggatggaacaactgctgcttcgcttgatgacgatgggctgaaccaa
ccagaactgttgacaagtagatgtggcattccatgctattggtcaaagaggagtaaacaa
aagggatctgaaaggagttgttctccttcactttctgatacccttagaagaaaagggagc
agccttttatgtggtagtcagacaatgcatcgaaggaagaaatcatcaggctccaataaa
tatggatatcttaataaatcttcccaaggtgtgccactgttgggtgatagtagtcacttt
gcttattcatcatttgattcagcaagtgatgaagtttcaaccatctttggagaattagat
ctggaagctttgagccgtttggatggcagaaggtggtcaagctgtaaaagccaggatggg
atcgcactgtctgtgagtggagctgatcatgtagttccagaccacagaagcttaagccag
aaatatcggccaaggtcatttctcgaaattgttggtcaaaattttgtcgtacaatcactt
agtaacgccatcacaagggaaagaatagctccagcatatctgttccatggacctcgtggg
actgggaaaacatctgctgcaagaatattttcagcagctttaagttgtactgctactgga
gaggccaagccctgtgggatttgcacagagtgtaatgactttttcactggaaatggaatt
aatctaattgaggttgatgctaccaacagaaaaggcataaacagagttaggcacttgatt
gaaaatataccagcatccgcaacttcttcacggtacaaagtattcgttgttgatgaatgc
catatggtatcttctaaagtctggtcggcatttatgaaatttcttgatgagccattgcct
cgtgttgtcttcatatttataacaatagatcctgaaaacctccctcgttctgtcatatcg
cgttgtcaaaagtacatgtttgccaagatcaaagacattgacatagtatgccgattgagg
aaaattgctatgaaggagaaccttgatgttgaattggccgctctagatttaatagcgcta
aattcagacggatcgttgagagatgcagagacaatgttagatcaactatgtttactaggg
aagaagataacaccatcgcttgtaaatgatctggttggggttgtgtccgaggagaaactc
cttgacctattggagatagccatgtcatcagacactgccgaaacagtcaaaaggtcaaga
gagctgatggattccggtgttgatccaacggcattaatgtcacaattagctggactcata
atggacatcattgctgggacctatagattagcggatcctacttgcggtggagatggcatt
ggtggtcgaaatataactgatgctgagttggaaagattacaacaagcattgaggattctt
tctgatgctgaaaaacagataagactctcaagtgagcgttcgacatggttcactgcagct
ttactccagcttggctcgggtcataattcagaaataacccaatctagaagcagcagtaag
caaagcgctaaagcaaccagtgaaaccatgatggaagcagtgagagaatcctctgcgagc
aggactacatctcatcctttattcgctttccgtgattcaaagaaagcattggatctcaaa
acaaccagcgggcactccagtcctcagggcccttcgttgtcgtcgaggatgaaacccaat
gacaactttatttatggcgaatgtaggtctgttgatagagcattactggattctgctcaa
acaagtattccttctgaacaaaggaatacaaatagtggaatctcagataaccttacccga
atttggatgaaatgcatagagaactgccactccaagacattgcggcagcttctctatgat
catgggaaactagcatctgtcaaagaatgtgaaggcaccattattactttcgtagcattt
gaggacaacgatataaagtttcgagcccaaaggtttgttagcagcatcaggaactcaatg
gaaactgtactgaaatgcaatgtggaagtcaggatttgtttaatgcaagaatttctcgcc
ggaggactacagcatcaggtgtatccagatgaaacaggcgagtctgatgttttgagttgc
tcaacaaacagtgagcgtctgaagggagttttgaacccgtcaggtgctggtggtggacta
cagtcaagcaacgttcccatgataatctctgaaggaaattcagggatacatagaacacga
gggcaggaggtcgctgttgaacagttgaagacggcagctcttgatgagcaaaggttagag
agtgcatggctccagactgctgaaaaacacacacctggtacgttaaatcaagcaagaccg
gagagaaatcaagttcttccacaaactgtgggtcagcatcatgggaggccctcaatggcc
actattgttccctcgaggcatgctgacaaggatctgactaatgaattgaaagccttaaag
atcagtgacagccatggttcccagaaatatcagaatgtacagacagagaatggttatgct
atttcaccaagcctcttgcacagaaataaccatttggcaaattgtgacaatgagagtgtg
gtttctgagtctggagcaccaggttgccatgggctcttcccatgctggaaaactgaaaaa
acaaaaagaagaaagggaaaagggcagacacggttgaggtcatcttaa
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