Setaria viridis (green foxtail): 117856931
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Entry
117856931 CDS
T07951
Name
(RefSeq) uncharacterized protein
KO
K20102
YTH domain-containing family protein
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
svs03019
]
117856931
Messenger RNA biogenesis [BR:
svs03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
117856931
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YTH
Motif
Other DBs
NCBI-GeneID:
117856931
NCBI-ProteinID:
XP_034595273
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Position
5:32578894..32584986
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AA seq
610 aa
AA seq
DB search
MEPKGELGQKPIEEAMDSLKIDASTKASNVNLPAKKDASSSDAVSCISSGDAASTVKESE
MNQEASIGDQGMYYYGYYYPGSYGGWDENGYFVGYNGLEMHPAVVQGDNGSYLCYLPGYE
SGYASYSPVVPGGITSADGQYVSKEPYYSTAIPMQDPSTPGIFAQPIAYGPELVPAYSWD
PSFVLLDGVQGHPVGVHQTNYAARPKYSSNKHGVPSSKAARSAKSAPETIKGSSSALETL
PNAANSIPLSKGANKASGASTTKGYLPSSKFVTHSNNQGKSSVYQNKGINVKENGRSWIN
NEKLKTRSKLNGHGDSDISNENSHTDNSKHSLSPRGDVVGLSSAGDANETILSPVTISKN
AYNLPDFVTKYEQALFFVIKSYSEDDIHKSIKYSVWASTPNGNKRLDNAYRLAQERMEEK
GTKCPVFLFFSVNASGQFCGVAEMVGPVDFNRNMNFWQQDKWNGFFSVKWHIIKDVPNPQ
FRHIILENNENKPVTNSRDTQEVKFPQGTEMLNIFKNFSCKTSILDDFDFYENRQKVMQD
RRGKPLTTSFDHPLPKAEKPAEIKKQTQLISGAQLDTTKKSEEQSNNVAEVLDVAQSNKE
LPSKVATEGR
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atggagcccaagggcgagctgggccagaagcctattgaagaagcaatggacagcttgaag
attgatgctagcacgaaggcaagcaatgtcaacttgcctgctaagaaagacgcaagttct
tctgatgcagtatcttgcatttcctcgggcgacgcagctagtactgtgaaggaaagtgaa
atgaaccaagaagcttctattggggaccaagggatgtattactacggatattactatcct
ggctcatatggaggatgggatgagaatggctactttgttggatataatggcctagagatg
cacccagcagtggttcaaggtgataatggctcatatttgtgttatctcccggggtatgaa
agtggatatgcttcgtatagtccggttgttcctggaggcattactagtgcagatggtcaa
tatgtcagcaaagagccatattactccactgcaattccaatgcaagatcctagcacacct
ggcatttttgctcaaccaattgcttatggacctgaactagtccctgcgtactcatgggac
ccttcttttgttcttctggatggggttcagggacatccagttggtgtgcatcaaacaaat
tatgctgcaagaccaaaatattcttctaataagcatggtgttccttcctccaaagctgcc
cgcagtgcaaaatctgctccagaaactatcaaaggatcatcatcagctctagaaacttta
ccaaatgctgctaatagcatcccattatcaaagggtgcaaataaggcatctggtgcttcc
acaacaaaaggatatcttccatctagcaagtttgtgacgcatagtaataaccaaggaaaa
agcagtgtttatcaaaacaaaggcattaatgtgaaagaaaatggtagaagctggatcaac
aatgagaagcttaagacgagaagtaagctaaatggacatggtgattctgacatatctaat
gagaatagccacactgataactcaaaacacagtttaagccctcgaggtgatgttgttgga
ttgtcaagtgctggagatgctaacgagaccatactttcacctgtcacgataagcaaaaat
gcatataatcttccagattttgttacgaagtatgagcaagctctattctttgtaattaaa
tcttacagtgaagatgatattcacaagagtatcaagtacagtgtctgggcaagtactcct
aatggaaataaaaggcttgacaatgcctatagacttgcacaggaaaggatggaagaaaaa
ggaaccaaatgtcctgttttccttttcttctctgttaatgcaagtggtcagttctgtggt
gtggctgagatggttggtccagtagattttaacaggaacatgaacttctggcaacaggac
aagtggaatggtttcttttcagtaaaatggcacattatcaaggacgtgcctaatccacaa
tttcgtcacataattttggagaataatgagaacaaacctgtgacaaatagcagggacaca
caagaggtcaaatttccacaaggtacagagatgctgaacattttcaaaaacttctcatgt
aaaacatcaatattggacgattttgacttctacgagaatcggcagaaagtaatgcaggac
agaaggggaaaaccacttactacgtcatttgatcacccattgccgaaagctgagaaacct
gcagaaattaaaaagcaaacacaattgataagtggcgcacagcttgatacaaccaagaaa
agtgaggaacagagcaacaatgttgcagaagtacttgatgtcgcccaaagtaataaagag
ctacccagcaaggttgcaacagaaggacgatga
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