Setaria viridis (green foxtail): 117856959
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Entry
117856959 CDS
T07951
Name
(RefSeq) CRS2-associated factor 2, chloroplastic
KO
K27710
CRS2-associated factor 2, chloroplastic
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
svs03041
]
117856959
Spliceosome [BR:
svs03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
117856959
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
CRS1_YhbY
Motif
Other DBs
NCBI-GeneID:
117856959
NCBI-ProteinID:
XP_034595304
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All DBs
Position
5:13417547..13422341
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AA seq
624 aa
AA seq
DB search
MPPPPPQRPAPSRAGRVNLFSAPPPPLSNRRYPQHRSLPLPPVPPRRRHPKNHAEQPSED
QEPTDGGPRATTTTNNPAFRATHLRTAYRKPVPPVAAAGEGEALLAADPADAASGRAVVV
GPSGLSFRLPGAPFDFQFSYSEAPRAPPLAIREPAFLPFAPPTMPRPWTGKAPLLTKEEK
ARRRGVRLHTPLGQEPAQTVSPHGIMMEVRGRRQMDLARVSPGDGRTRDEVLGEPLTPAE
VRALVKPHISHNRQLNIGRDGLTHNMLEMIHCHWRRQEVCKVRCRGVPTVDMNNLCYHLE
EKSGGKVIHRVGGVVFLYRGRHYDPRTRPRYPLMLWKPATPVYPKLIKEAPEGLTKEEAD
EMRSKGRNLPPICKLAKNGIYITLVKDVRDAFEGNDLVKIDCEGLNPSDYKKIGAKLRDL
VPCVLLSFDNEQILMYRGKEWKSRYSKPLTLIPKVPKNNPTPKVPKNNPTMSSDASGSDV
NEATDANTQFTVREVLRPKMFKLWESAVDLSLALLLDDAEANDLTPDSLLTRVEEFSVTS
QAVEHSFPALLVANCEVNTESPSAEYINDESETSIAGNQEEQLEQSPDLSSDEHFELDML
ERLESSVPLGSLPIDTMIEQLNSE
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgccgccaccgccaccgcagcggccagctccctcccgcgccggccgcgtcaacctcttc
tccgccccgcctcctccactctccaaccgccggtacccccagcaccggtcccttcccctc
ccgccagtcccccctcgccgccgacaccccaagaaccacgccgagcagccttccgaagac
caggagccgacagacggcggtccaagagcgaccaccaccaccaacaaccccgccttccgc
gcgacccacctccgcaccgcgtaccgcaagcccgtgcccccggtcgcggccgccggcgag
ggcgaggccctcctcgccgccgaccctgccgatgccgcctcggggcgcgccgtcgttgtg
gggccctcgggcctctccttccgcctacccggcgcgccgttcgacttccagttcagctac
tccgaggcgccgcgcgcgccgccgctcgccatccgcgagcccgcgttcctgcccttcgcg
ccgccgaccatgccgcggccttggacgggcaaggcgccgctgctgaccaaggaggagaag
gcgcgccgccggggcgtgcggctgcacacgccgctcgggcaggagccggcgcagacggtg
agcccgcacgggatcatgatggaggtcagggggaggaggcagatggacctggcaagggtg
agccccggcgacggcaggactagagatgaggtgctcggcgagccgctcacccccgccgag
gtgcgtgcgctcgtcaagcctcacatctcgcacaaccgacagctcaacattggaagagat
ggcttgactcacaacatgttggaaatgatacattgtcattggaggcggcaggaagtctgc
aaagttagatgccgaggcgttccaactgttgatatgaacaatctctgttatcaccttgag
gaaaagtcaggaggaaaggtcattcaccgagtaggtggcgttgtttttctatatcgagga
agacattatgacccacggactcgtcctcgctatcccctgatgctctggaaacctgctact
cctgtatatccaaaactcatcaaggaagctccagaagggcttacaaaagaagaagcagat
gaaatgagaagcaaagggcggaatctgccgccaatttgtaaactagcaaaaaatggaata
tatatcactcttgtcaaggatgtgcgagatgcttttgaaggaaatgacctggtgaagatt
gattgtgagggtttgaatccaagcgactacaaaaagataggagcaaaactaagggatctt
gttccctgtgttcttttatcattcgataatgaacagatattaatgtacagaggcaaagaa
tggaaatccagatactcgaagcctctgactctcattccaaaagttccaaagaataatccg
acaccaaaagttccaaagaataatccgacaatgtcttctgatgcaagtggttcagatgtc
aatgaagccactgatgccaacactcaattcacagtaagagaagtattgaggcccaaaatg
tttaaattgtgggagagtgcagtggacttgtctctggcattgctgctggatgatgccgaa
gcaaatgatctgacacccgattcactcctgacgagggttgaggagttcagcgtcacatct
caggcagtggagcactcatttccagctctgcttgtggccaattgtgaggtgaacaccgaa
tctccaagtgcagaatacataaacgatgagtctgaaacaagcattgctggaaaccaagag
gaacagcttgagcaatcacctgatctcagcagcgatgaacactttgaactcgacatgctt
gagcgtctggagtcatcggtgccattgggatccctgccgatcgacactatgatagagcag
ctgaacagtgagtga
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