Setaria viridis (green foxtail): 117856993
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Entry
117856993 CDS
T07951
Name
(RefSeq) light-mediated development protein DET1 isoform X1
KO
K10571
de-etiolated-1
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
117856993
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
svs04121
]
117856993
Ubiquitin system [BR:
svs04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
117856993
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Det1
DUF1687
Mer2
Motif
Other DBs
NCBI-GeneID:
117856993
NCBI-ProteinID:
XP_034595346
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Position
5:complement(18839770..18848871)
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AA seq
511 aa
AA seq
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MVRLFRSGNLASRVFDRQLLSPRPGAAVNTIRQFYENLVPSYTIYDIDCPDYSFRKFTDD
GKYLVAFSRNHQDLIVYRPIWLTYSCNEECGSHDLPPKAKKFDSFFKQLYSIPLASSNEY
ICKDFFLYMEGHQFGLFATSTAQSNDSTATEGAIHGVPSIEKITFYLVRLEDGVILDEKA
FCNDFINLAHSIGAYLYEDLLCIVSLRYQTIHILQIRDSGNLVEVRRIGAFCREDDELFL
HSHVQTGFGGSFLPGIKQRLLSYIFRKTWNEVPDETLRVQHLKKKFYFHFQDYVDLIIWK
VQFLDRHHLFIKFGSVDGGVSRSTDQNLAFFAVYNMETTDIISLYQNSSEELYSLFEQFY
DHFHANPQDSSHGKFISSHSNDIHALDQLRTIKNKASSSSQFVKKMMASLPYTCQSQSPS
PYFDLSLFRYDEKLISAIDRHRHCTEHPIKFISVRSPNVVRFKIKPGSDSGASDSRAKRI
SSFLFHPFFPFALSIQQTYMQPTVVNIHFRR
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atggtgcgcttattccgcagcggtaacctcgcctccagggtcttcgaccgccagctcctc
tccccgcgccccggcgctgccgttaacactattagacagttctatgagaatttggttcca
agctacactatatatgacattgattgcccagactattcatttcgcaagttcactgatgat
gggaaatatcttgtggcctttagccgaaaccaccaagatttgattgtataccgtcccatc
tggttgacatattcatgcaatgaagaatgtggttctcatgatcttccaccaaaagcaaag
aagtttgatagcttctttaagcagctctactcaattccgcttgcatccagcaatgagtac
atttgcaaggactttttcctgtacatggagggccatcaatttggcttatttgcaacatca
actgcacaaagtaatgattcaactgccactgagggtgcaatacatggcgtgccatcaatt
gagaaaataactttctatcttgtgaggctagaagatggcgtcatactggatgaaaaggct
ttctgcaatgattttatcaatctggcacatagtattggtgcttacttgtatgaggacctg
ctttgtattgtttctctgagatatcaaacaatacatatcctacagatccgagattcaggc
aaccttgttgaggtacgcagaattggcgctttctgccgggaagatgatgagctatttctt
cactcacatgttcagactggttttgggggttcgtttcttcctggcatcaagcaacggttg
ttgtcgtatatttttcgcaagacatggaacgaagttccagatgagactttgagggtccag
catctcaagaagaagttctattttcacttccaagactatgttgatcttatcatatggaag
gtacagtttttggatcgacatcacctattcatcaagtttggtagtgtggatggaggggtt
tctcgaagcactgatcaaaacttagcattctttgctgtgtataacatggagacaacggat
atcatttccctttaccagaactcatcggaggagctctattccttgtttgaacaattctat
gaccattttcatgcaaatccacaagattcatcacatggaaaatttatctcgtcgcactcc
aatgatattcatgctctcgatcaacttcgcacaataaaaaataaagcaagcagctcctca
cagtttgtgaaaaagatgatggcgtcattgccttacacttgccaatcacagagcccttca
ccatattttgatctatccctttttaggtatgatgagaagctgatttcagcaattgatcgg
catcggcattgcacagagcatccaataaaatttatatcagtgaggtcaccaaatgttgtc
agatttaagatcaagccaggttcagattctggtgcttctgacagcagagcaaaaagaatc
tcgtccttcttgtttcacccatttttcccattcgcactttcgatacagcagacttatatg
cagccaaccgttgtcaatatccatttcaggagatag
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