Setaria viridis (green foxtail): 117857080
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Entry
117857080 CDS
T07951
Name
(RefSeq) alpha-amylase 3, chloroplastic
KO
K01176
alpha-amylase [EC:
3.2.1.1
]
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs00500
Starch and sucrose metabolism
svs01100
Metabolic pathways
svs01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
117857080
Enzymes [BR:
svs01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.1 alpha-amylase
117857080
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GFIT
Motif
Pfam:
Ig_N_CWD1
Alpha-amyl_C2
Alpha-amylase
Glyco_hydro_70
Motif
Other DBs
NCBI-GeneID:
117857080
NCBI-ProteinID:
XP_034595456
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Position
5:34464221..34474990
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AA seq
882 aa
AA seq
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MSVGSGCIPAIPGAAPPARGRLLGGAFLQVAAARPRAGRCRVAQNGRVRLGGRVVARASA
AETPVAGAGEDAGAAFSEKFPLRRCQTVEGKAWVRVDAEPDGDGKCKVVVGCDVAGKWVL
HWGVSYDGEHGSEWDQPPSEMRPPGSVPIKDYAIETPLEILPNSEGRYEVQIKFDKDTPI
AAINFVLKEEETGAWFQHKGRDFRIPLSGSFDGGVPLGTNQDIGVWPGDLGHLKKHEGSN
AQPQETIPGGTGLSGKHISGFYQEFQIIKSEYTQNFVTVTVKRDNETHKRLVEFDTDIPG
EVVIHWGVCKDNSMTWEIPPEPHPPTTKIFRQKALQTLLQQKADGRGNSLSFLLDAEYSG
LFFVLKLDEYTWLRNLENGSDFFISLTRAEQRGSTQDVDKVEPQKVDDKSSQADGIISDI
RNLVVGLSSRRGQRAKNKVLQEDILQEIERLAAEAYSIFRSPTIDSVEASVDLDDPSIAK
PACSGTGSGYEILCQGFNWESHKSGKWYVELGTKAKELASLGFTIVWSPPPTDSVSPEGY
MPRDLYNLNSRYGTMDELKELVKIFHEAGIKVLGDAVLNHRCAQFQNSNGIWNIFGGRMN
WDDRAVVADDPHFQGRGNKSSGDSFHAAPNIDHSQEFVRNDLKEWLCWMRKEVGYDGWRL
DFVRGFWGGYVKDYLEASEPYFAVGEYWDSLSYTYGEMDYNQDAHRQRIVDWINATNGTA
GAFDVTTKGILHAALERSEYWRLSDEKGKPPGVLGWWPSRAVTFIENHDTGSTQGHWRFP
YGMELQGYAYILTHPGTPAVFYDHIFSHLQPEIAKFINIRSRQKIHCRSKIKILKAERSL
YAAEIDEKLTMKIGSEHFEPSGPQNWIVAAEGQDYKIWEVSS
NT seq
2649 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtggggagcgggtgcattccggcgatcccgggcgcggccccgccggcgaggggc
cggctgctcgggggcgccttcctgcaggtggccgccgcgcggccgcgggcggggcggtgc
cgcgtcgcgcagaacgggcgcgtgaggctcggcggccgcgtcgtggcccgagccagcgcc
gcggagactccggtggctggcgccggcgaggacgccggggcggcgttctccgagaagttc
cccctgcgccgatgccagacggtggaagggaaggcgtgggtgagggtggacgcggagccg
gatggggacggcaagtgcaaggtcgtggtcggatgcgatgtggcggggaagtgggtattg
cactggggtgtctcttacgacggtgagcatgggagtgaatgggatcagcctccttcagaa
atgagaccacctggttctgttccaatcaaggactatgcaattgaaacaccattggagatt
ctacccaattcagagggccggtatgaagtgcaaatcaaatttgataaagacactccaatt
gcagccatcaattttgtcctaaaggaagaggaaacaggtgcatggtttcagcataagggc
agggatttcagaatacccttaagtggatcctttgacggtggagttccattaggaacaaac
caagatattggtgtatggccaggagatttgggccatttgaagaaacatgaaggatctaat
gctcagccacaagaaactatacctgggggtacaggtttaagtggaaaacatatttccggg
ttctatcaggaattccaaattattaaatcggagtacacccagaactttgtaactgttact
gtgaagagggataatgaaacacataaaaggcttgtggaatttgacaccgatattcctgga
gaagttgtcatccattggggagtttgcaaagacaatagcatgacatgggagatccctcca
gagccacacccaccaacaacaaaaatcttccgacagaaagctcttcagaccttgctacag
caaaaagctgatggaagaggcaattctttatcattcttactagatgcagagtattctggt
ctgttttttgtgctcaaacttgatgagtatacttggctgagaaatctggagaatggatcc
gatttcttcatttctcttacaagagcggaacagcgtggaagcacccaagatgttgataag
gttgagccacagaaagttgatgataagtcttcacaagctgatggtataatcagtgatata
agaaatctggtggttggcctatcctctagaagaggtcagagagctaagaataaagttctg
caggaggatatcctgcaagaaattgaaaggctagcagcagaagcttatagcatttttagg
agccccaccattgattccgtagaggcgtctgtagatctcgatgacccatcaatcgcgaag
ccagcttgttctggcactggatctggctatgaaatattatgccaaggatttaactgggaa
tctcataagtcagggaaatggtatgttgaacttggtacaaaggccaaggagttggcatcc
ctcggttttaccattgtttggtcaccaccgcctactgattctgtgtcacctgaaggatac
atgccaagggatttatataatctaaactccagatatgggaccatggatgagttgaaggag
cttgtgaagattttccacgaagctggcatcaaggttcttggtgatgctgttctaaatcac
aggtgtgctcaatttcagaatagcaatggtatctggaatatttttggtggccgtatgaac
tgggatgatcgagcggttgtagcagatgatccacatttccagggaagaggaaacaagagc
agtggagatagctttcatgcagcaccaaacattgatcactcccaagagtttgtgaggaat
gatcttaaagaatggctttgctggatgagaaaagaagtaggatatgatggatggagactc
gacttcgttcgtggtttttggggtggatatgtcaaagattatttggaagcaagtgagcca
tactttgcagtaggagagtactgggactccctcagttacacttatggtgaaatggattac
aatcaagatgcccacagacagaggattgttgattggataaatgctacaaatggaactgcc
ggtgcatttgatgtcaccaccaaagggatacttcatgcggcgcttgaaagatctgagtat
tggcgcttgtctgatgaaaaaggaaaaccccctggagtattgggctggtggccttcccga
gctgtcacatttatagagaatcatgatactggctctactcagggtcattggagattcccc
tatggtatggagttgcaaggatatgcctacatcctgacgcaccctggcactccagcagtc
ttctatgatcacattttttcgcacttacaaccagagatcgccaaatttatcaatattcga
tctcgtcaaaagattcattgccgcagcaagatcaagatactcaaggcagaaaggagttta
tatgcggctgaaatcgatgagaagttaacaatgaaaatcggctcggaacattttgagcca
agtggtccccagaactggattgttgctgccgagggtcaagattacaaaatttgggaagta
tcttcatag
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