Setaria viridis (green foxtail): 117857135
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Entry
117857135 CDS
T07951
Name
(RefSeq) transcription initiation factor TFIID subunit 12
KO
K03126
transcription initiation factor TFIID subunit 12
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
117857135
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
svs03021
]
117857135
03036 Chromosome and associated proteins [BR:
svs03036
]
117857135
Transcription machinery [BR:
svs03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
117857135
Coactivators
SAGA/TFTC/STAGA complex
117857135
Chromosome and associated proteins [BR:
svs03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
117857135
STAGA complex
117857135
TFTC complex
117857135
SAGA complex
117857135
SLIK complex
117857135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIID_20kDa
CBFD_NFYB_HMF
Histone
Piezo_TM25-28
LptF_LptG
Motif
Other DBs
NCBI-GeneID:
117857135
NCBI-ProteinID:
XP_034595528
LinkDB
All DBs
Position
5:complement(41261084..41266304)
Genome browser
AA seq
499 aa
AA seq
DB search
MDAPPPSQPEAAAAAPPSSTSASAPSPAPPPTPPTSAASAAPSSDSTITTPTPNPGTAAN
PAQTLEAPGPSPAAARPRMRPPYTHLASPITMSSASSAATAAASSSASVPSSSSSAPAVP
RGGVVIGVPAPRPAQTPAGYTGFVPPPSLAHQFGSMHRGPDQPPPPSSQFRQPSPGIQNI
GMVGSLSTSQMRPGIISGPQQPRPGLPSSTTPIPSGSQMPGSQRTPSHALMRPMSVSSPS
PSPALQQTPQNSSTFRPQQRPQVPQPRPQQSSPVTPHQQNIISAQQQQLPHNQLLQQQQQ
KQQQQSSSQQTQQNTTPKNQQQHSQQQAARTPVTMAQKPDSPAIAKATVLQSADTAATDA
DGSETGTRLLNKRSIHELVAQIDPNEKLDPEVEDVLMDIAEDFVESVATFACSLAKHRKS
NTLEAKDVLLHAERSWNITLPGFSGDEIKLYKKQHINDIHRERLALIKKSMATDTKNSAA
QAATNQKNQTPKPPAPASP
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgcctccgccctcgcaaccggaggccgcggcggcggcgccgccctcctcgacc
tcagcttctgctccctctccggcgccaccacctaccccaccgacttccgccgcctctgca
gcaccctcttccgactccaccatcaccacccctaccccgaacccaggtaccgcagcaaac
cccgctcaaaccctagaggcccctggccccagccccgctgctgcgcggccgcgaatgagg
cctccttacacccacctggcctcgcccatcacgatgtcctcggcctcctctgctgccaca
gctgctgcctcctcctcggcttccgttccgtcctcttcttcctcggcacccgctgtgcca
aggggaggggttgttattggggtgcctgcgccgcgtcccgcacagacgcccgctggttac
accgggttcgtgccgccgccttcccttgcccaccagtttggatcgatgcatcgcggccca
gaccagcccccaccgccatcttcacagtttaggcagccttcccctggaattcaaaatatt
gggatggttggatcccttagcacatcccagatgcgaccaggaataatatctggtccgcag
cagccaagacctggccttccatcatcaacaactccaattccatctggaagccaaatgccc
ggatcacaaagaaccccctcccatgctttaatgaggccgatgtctgtgagttctccttct
ccttcccctgctttacagcaaactccacaaaattcatcaacatttaggccgcaacaaagg
ccacaagttccacaaccaagaccacaacaatcttcacctgtgactccacatcaacagaac
ataatttcagcacagcagcagcaactaccacacaatcagcttttgcagcagcagcagcaa
aagcaacagcagcaaagttcctcgcaacaaactcaacagaatacaacacccaaaaatcag
caacagcattctcagcagcaagctgctcgtactccagtgacaatggcacagaagcctgat
tcgcctgctatagcaaaagctactgttttgcaatctgcggatacagctgcaactgatgca
gatggtagtgaaactggcactcgactactcaacaagagaagcatacatgaattagttgca
cagattgatcctaacgaaaagctggatcctgaagttgaagatgttcttatggacatcgca
gaagattttgttgagtctgtcgctacatttgcttgttctttagcaaagcataggaagtca
aacaccctagaagcaaaagatgtactcctccatgcagagagaagctggaatatcaccttg
ccaggcttcagcggggatgaaatcaaactatacaagaaacagcacataaatgatattcac
agggagaggcttgctctgatcaagaagtcaatggcgactgacacaaaaaactctgccgcc
caagctgcaacgaaccagaaaaatcagactccgaaaccacctgcccctgcttccccatga
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