Setaria viridis (green foxtail): 117857154
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Entry
117857154 CDS
T07951
Name
(RefSeq) RING-H2 finger protein ATL78
KO
K19040
E3 ubiquitin-protein ligase ATL10/75/76/77/78 [EC:
2.3.2.27
]
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
svs04121
]
117857154
Enzymes [BR:
svs01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117857154
Ubiquitin system [BR:
svs04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
117857154
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-rbx1
zf-ANAPC11
zf-C3HC4
zf-RING_5
zf-C3HC4_3
zf-RING_UBOX
zf_RING_Vps8_fungal
SLX1_C
FANCL_C
zf-RING_16
zf-RING-like
zf-C3H2C3
zf-RING_4
Prok-RING_1
Motif
Other DBs
NCBI-GeneID:
117857154
NCBI-ProteinID:
XP_034595555
LinkDB
All DBs
Position
1:26549375..26550807
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AA seq
225 aa
AA seq
DB search
MQEGYVFSRRALLLAPLHSYGENAAASQVVAGGQEAPAAEAVGSGGNSFDANVVMILAVL
LCALICALGLNSIVRCALRCSTRMPSSPGSARRQQPAMGEPGLRLAQAGARRKALRAMPT
LVYSAGLLPLQAAGGGGGPVCAICLAELEPGERVRVLPKCNHGFHVRCVDRWLLARSTCP
TCRQSLFAAPQKGSSCADTGAGAEPPVRAFLVPLRPEGFVTPYDF
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
atgcaagaagggtacgtgttctcgaggagggcgttgctgctggcaccgctgcacagctac
ggagagaatgctgcggcgagccaggtggtggccggcgggcaggaagctccggcggccgaa
gccgtcgggagcggcgggaacagcttcgacgcgaacgtggtgatgatcctggccgtgctc
ctgtgcgcgctcatctgcgcgctggggctcaactccatcgtgcggtgcgcgctccggtgc
tcgaccaggatgccgtcgtcgcccggcagcgcgcggcggcagcagccggccatgggggaa
ccggggctgcggctggcgcaggcgggcgcgcggcggaaggcgctgcgcgcgatgccgacg
ctggtgtactcggcggggctgctgccgctgcaggcggcaggcggcggcggcggccccgtg
tgcgccatctgcctggccgagctggagcccggggagcgcgtgcgggtgctgcccaagtgc
aaccatggcttccacgtccgctgcgtcgaccggtggctgctggcgcggtccacgtgcccg
acgtgccggcagtcgctgttcgccgcgccgcagaagggctccagctgcgccgacaccggc
gccggcgccgagcctccggtgcgggcgttcctcgtgccgctccggccggaaggtttcgtc
acgccgtacgatttttag
DBGET
integrated database retrieval system