KEGG   Setaria viridis (green foxtail): 117857154
Entry
117857154         CDS       T07951                                 
Name
(RefSeq) RING-H2 finger protein ATL78
  KO
K19040  E3 ubiquitin-protein ligase ATL10/75/76/77/78 [EC:2.3.2.27]
Organism
svs  Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:svs00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:svs04121]
    117857154
Enzymes [BR:svs01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     117857154
Ubiquitin system [BR:svs04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   ATL proteins
    117857154
SSDB
Motif
Pfam: zf-RING_2 zf-RING_11 zf-C3HC4_2 zf-rbx1 zf-ANAPC11 zf-C3HC4 zf-RING_5 zf-C3HC4_3 zf-RING_UBOX zf_RING_Vps8_fungal SLX1_C FANCL_C zf-RING_16 zf-RING-like zf-C3H2C3 zf-RING_4 Prok-RING_1
Other DBs
NCBI-GeneID: 117857154
NCBI-ProteinID: XP_034595555
LinkDB
Position
1:26549375..26550807
AA seq 225 aa
MQEGYVFSRRALLLAPLHSYGENAAASQVVAGGQEAPAAEAVGSGGNSFDANVVMILAVL
LCALICALGLNSIVRCALRCSTRMPSSPGSARRQQPAMGEPGLRLAQAGARRKALRAMPT
LVYSAGLLPLQAAGGGGGPVCAICLAELEPGERVRVLPKCNHGFHVRCVDRWLLARSTCP
TCRQSLFAAPQKGSSCADTGAGAEPPVRAFLVPLRPEGFVTPYDF
NT seq 678 nt   +upstreamnt  +downstreamnt
atgcaagaagggtacgtgttctcgaggagggcgttgctgctggcaccgctgcacagctac
ggagagaatgctgcggcgagccaggtggtggccggcgggcaggaagctccggcggccgaa
gccgtcgggagcggcgggaacagcttcgacgcgaacgtggtgatgatcctggccgtgctc
ctgtgcgcgctcatctgcgcgctggggctcaactccatcgtgcggtgcgcgctccggtgc
tcgaccaggatgccgtcgtcgcccggcagcgcgcggcggcagcagccggccatgggggaa
ccggggctgcggctggcgcaggcgggcgcgcggcggaaggcgctgcgcgcgatgccgacg
ctggtgtactcggcggggctgctgccgctgcaggcggcaggcggcggcggcggccccgtg
tgcgccatctgcctggccgagctggagcccggggagcgcgtgcgggtgctgcccaagtgc
aaccatggcttccacgtccgctgcgtcgaccggtggctgctggcgcggtccacgtgcccg
acgtgccggcagtcgctgttcgccgcgccgcagaagggctccagctgcgccgacaccggc
gccggcgccgagcctccggtgcgggcgttcctcgtgccgctccggccggaaggtttcgtc
acgccgtacgatttttag

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