KEGG   Setaria viridis (green foxtail): 117857323
Entry
117857323         CDS       T07951                                 
Name
(RefSeq) serine/threonine-protein kinase ATM isoform X1
  KO
K04728  serine-protein kinase ATM [EC:2.7.11.1]
Organism
svs  Setaria viridis (green foxtail)
Pathway
svs03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:svs00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    117857323
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01001 Protein kinases [BR:svs01001]
    117857323
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:svs03032]
    117857323
   03036 Chromosome and associated proteins [BR:svs03036]
    117857323
   03400 DNA repair and recombination proteins [BR:svs03400]
    117857323
Enzymes [BR:svs01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.11  Protein-serine/threonine kinases
    2.7.11.1  non-specific serine/threonine protein kinase
     117857323
Protein kinases [BR:svs01001]
 Serine/threonine kinases: Other
  PIKK family [OT]
   117857323
DNA replication proteins [BR:svs03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    117857323
Chromosome and associated proteins [BR:svs03036]
 Eukaryotic type
  Meiosis-specific proteins
   DSB formation-related proteins
    117857323
DNA repair and recombination proteins [BR:svs03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    117857323
SSDB
Motif
Pfam: PI3_PI4_kinase FATC FAT HEAT_ATR
Other DBs
NCBI-GeneID: 117857323
NCBI-ProteinID: XP_034595823
LinkDB
Position
5:5468670..5515091
AA seq 2773 aa
MECINTFLLKDGPNLGYKSVEIHHVVQEFIFHCWPATLDQALKSLFITYAKVQLKLARAI
PEILEKLVDIIIKELDKNVNTGPGFLWCEAPRDEKAGSLRCFQEECMDLSATVFYLAHKC
TLKTQNREKRLKTEHIMNLIVDGLLKGSLFWSGSVCFLIHKYGYRVEKSLLISWFEASCK
ALRSVLSHANAIKFQDSILWLLRALKEFSMVLMFNPREESQFCLTKSEMSIVESCWQDIW
NSLIHALPVFSSTALVADSALILLGGMIVRDQVHTSFLSEDTWNLQIFKQMPSPSALYFI
ACYFSRIGFQGDLSNSIFIRKNLLRSTLELVHSKEFSLLNEQNVVLIPEAIFSLCAAFSS
LPINSSDTLQLFGDCKIYSKSLEDESWVLKDELLYSVEALSEITLDSSAKVISDKCHRVH
LPGTIQQPMLLELMDFIKGFVASNEQFEKLDLPNLVFVCSLLCNLVHRALLSRAMGDKSS
LMQEVLNYITNILKHIVSFVMKRNNELSHGLTNLSLPLDTTGSALSSFKSFLSSPLFNLS
RVDNRVSSVVIKGVTELLDELLVAISQLFSQLSSLVNSFDGENAGKVLPISCVNSQDLNP
IVDCKSSVADMDLDVMDSGEVDSVTTSGSGNMGSFLRPLEWKLELVSIISTFFSVSSLHT
WEILYNLVEKESDVKVCQVILLNLCRNISASSKTVSSMVHLINDTRDRCTSSLLNSTGCL
AYVHALLRTLVALRNSGQNTDGKQQGCKGIFSEVYSYYLQNEDVLLDLVNKATEISSADW
FSRIKLIDCISSFICLFPDVAQDLIGCLLDMLHDTDYRVRLYLAREIVVLFQTWEGHNEL
FYDVRSTIGAKMVAFSINSPVTAREVLAVGPQSVLVIETALITLAHLSVHSEDVEVECVF
MISAAAAIEPSQRELAYALFDSISKRLGYASRSKYLDQVMGPILFRWVACEMSLVSLVEV
QEMFGYGSAEPKNFVEHCSLWLLPFLILRGDAADLNWISKILSQPLPVIIKRYFVPIFGL
SIAARCGTGPEKDLAETALCESLLQLGEISELERDDLIKKHMVSIVALLLSVSSSSHGSQ
IPYFSKEVVALSVKTVVDGFVDTMDDDLAHTVVIDKINIFRADRVFKFLLAIHQQVADAC
HPRHMGNRLCAIEVLIDVLGHRVVRESTCFYIICIVGNYIQQKPLQGQCCNILSKLLAYF
DGNSSAETVEVLGRQLQVLVPKLITACLTNEKEERSGIADSSRVLSLLRQLTVDADPMLY
DYIRELEPLPCLDCLKDIREFHTSLSASYASRDQFLKFVNRAPHLPPELFLLSLRMYHNK
LLLGEIISRSDLSAADTDIVNCWCSDPDVVSAVWTLVDICSSSPVANEASPVVADFISRA
GLSDAHQVIFHLPTLIRKHPVELHSGSASKDDKLCSDYGISDDILVELLKLLKTYLSDES
VEIIDAASQTLRGVLSTTKGLNALQSLDSLDRSLLMVHSRGVNTQIVEQIILGMEKYSGV
SLEDSDMWQTDGRTYEQWLCTLVSSLICHCDDIILRLCRSLAFLKVKAAELLFASTLLNI
AGNVDSNAAICRLISTKVEKIIFSDSNHSLKSIHLFLDALNVIRSFYVAEKARSCPSNTF
QDGRSVRSKSRSPATTASSSWKKVYWLSVDYLVAARAASRCSCDFTALMYVELWCEEQFN
RLAIGPPDFSHEESLPPHVGLLVAAFTRINEPDSIYGITLANEITSQIIRYEHEGDWSSA
LEYYDLLVRSTPKEHLGNLTGSVLTGSSASRAEDKMLNCKMHKGLMRSLQKTGCSHVLDV
YCEGLTHLKGSLQQDAEFIDIQYEAAWRAGNWDFSFFIPYSSRSSTRTQSYCLFNENLHS
CLRSLENGDSEEFHAKLCQAKMDLVLALSSTSMESTKYIHSTILKLQMLDHVTMVWDLRW
SLCHNQTSESLPGTKKFSPVSTIPTGMQLELLDKEWNFIVFQTEHNLDLFEPFLAFRRAL
LKVLGCEEHLVTHLFQSASALRKGLRFSLAAAALYELKEHCFHQDGGIMPNTYFLSRLEE
AKLLRAQGQHDMAISLGKYILQKHSDKKDVSDVYRLVGKWLAETRSSNSGTIIEDYLRPS
MDLTEFKKSTDKRYMSRQCRTHFHMAHYTYSLFKSYEERLSSNEWQAALRLRKYKTRELE
TLIKRLKSSSKGVKTDYSVKIQELRKQLALDREEAQKIQDDRDNFLNLALQGYQRSLVVG
GKYDLQVVFRLVSLWFSLFSRDQVVKAMMKTTKEVQSYKFIPLVYQIASRLGSSNTQGSS
NFQIALASLLKKMALDHPYHTIFQLLALANGDRVKDKQRSRSSFVVDMEKKLAAENLLKE
LSSCHGALICQMKQMVEIYIKLAELETKKEDTNKRIPLPREVRSISQLELVPVVTATVPV
DPSCQYEVGSFPHFSGLADSIMIMNGINAPKVIECFGSDGNKYRQLAKSGNDDLRQDAVM
EQFFSLVNTFLQNHRDTSQRRLRIRTYKVVPFTPSAGVVEWVNGTVPLGEYLLGSTRISG
AHGRYGTGDWTYLQCREYLMSEKDKRRAFLKICNNFRPVMHHFFLEKFLLPADWFQSRLA
YTRSVAASSMVGYIVGLGDRHSMNILIDQDTAEVVHIDLGVAFEQGLMLKTPERVPFRLT
RDIIDGMGVTGVEGVFRRCCEKTLSVMRANKEALLTIIEVFVHDPLYKWALSPLKALQRQ
KEIEDTDSCLDDSQEAYEGNKDAARAILRVKQKLDGYEDGEMRSVQGQVQQLIQDAVDVD
RLCQMFPGWGPWL
NT seq 8322 nt   +upstreamnt  +downstreamnt
atggaatgcattaacacctttttactgaaggatgggccaaacttgggatacaaatctgtg
gagattcatcatgtagttcaagagtttatatttcattgttggccggcaactcttgatcag
gctttgaagagtttgttcatcacctatgcaaaagttcagctgaagcttgctagggctatt
ccagagattttggaaaaacttgttgacatcatcatcaaggaactggacaaaaatgttaac
accggaccaggttttctatggtgtgaggcacctcgagatgagaaagctgggtccttaaga
tgcttccaagaggaatgcatggatctgtctgctactgttttttatctggcccacaaatgc
acactgaagacacaaaatagggagaaaaggttgaagacagagcacattatgaacctcatc
gttgatggccttttgaaaggatctctgttttggagcggctctgtttgttttctgatccac
aagtatggatatcgagtggaaaaatctttgctaattagttggtttgaagcaagttgcaaa
gctttgagaagtgtcttgagccatgcaaatgccataaagtttcaggactcgatactctgg
cttctcagggctctcaaggagttctccatggtgctcatgttcaatcctagggaggaatca
caattttgtttaacaaaaagcgagatgtcaattgttgaaagttgctggcaagacatatgg
aattctcttattcatgcactccctgtgtttagcagcacagcactagttgctgattcagcg
ctgattttgcttggtggaatgattgtgcgggaccaagttcatacatcatttctatcagaa
gatacatggaacctgcaaatatttaaacaaatgccatcaccgtctgctttgtatttcatt
gcttgttacttctcaaggataggctttcagggtgacttatccaattctatctttattcgg
aagaatctgctaagatcgactttggagctagttcattcaaaggaattctctcttttgaat
gagcaaaatgttgttctcattcctgaagctattttctcactgtgtgctgctttttcgtca
ttaccaattaattcatcagatacattacagctgtttggtgattgtaaaatttattccaag
tctcttgaggacgagagctgggttctcaaagatgaactgctctactcagtggaagcttta
tcagaaatcactctggatagttctgccaaggttatttctgataaatgccaccgcgtacac
cttcctgggactatccagcaaccaatgcttcttgagctcatggacttcatcaaaggattt
gtggcctcaaatgagcagtttgagaaattggacttacctaatcttgtatttgtttgttct
cttctctgcaatctggttcatcgtgcattgttgtcaagggccatgggagataaatcttca
cttatgcaagaagtattaaattatatcaccaatattctaaaacatattgtgtcatttgtt
atgaagaggaacaatgaactttctcatggtctcactaacctaagtttaccattggataca
acgggctctgctttatcctcattcaagagctttctatcttctccattatttaatctgtca
agagttgataatagagttagttctgtggttatcaaaggtgttactgaattacttgatgaa
ctcttggtggcaatttctcagctgttttctcagctctctagtttagtgaacagttttgat
ggagagaatgccggaaaagtgttgccaatatcttgtgtcaactcacaggatctaaatcct
attgttgactgcaaaagtagtgttgctgatatggatcttgatgtgatggactctggtgaa
gtagattctgtcacaactagtgggagtggaaatatgggtagcttcttacgaccattggag
tggaagctagaactagttagcattatttcaacttttttctcagtttcgtcgcttcataca
tgggagatcttgtacaacttggtggagaaagaaagtgacgtgaaggtttgtcaggtcatc
ttgcttaatctttgcagaaacatctctgcttcatctaaaactgtatcttccatggtccac
cttataaatgatacgagggacagatgcacaagttcattacttaattctacagggtgctta
gcttatgtacacgctttgttaagaacattggtagctctgcgtaacagtgggcaaaatact
gatggaaagcaacaaggatgcaaagggattttcagtgaggtatattcctattatctgcag
aacgaggatgtcctattagacttggtaaataaggctacagagataagttctgcagattgg
ttttctcgcatcaagctcattgattgcatctcatcttttatttgcctgttccctgatgtt
gcccaggatctgattggatgtttgcttgacatgctgcatgatactgattatcgtgtcagg
ttgtatttggccagggaaattgttgtgttattccaaacgtgggaagggcataatgaatta
ttttatgatgttcgctcaactattggtgccaagatggtggctttctcaattaactctcca
gtcacagctagagaagtcttagctgttggtccacaatctgttcttgtaattgaaactgcc
ctcattacactagctcatttgtctgtgcacagtgaggatgttgaagttgagtgcgtgttc
atgatttctgctgctgctgctatagagccttctcagcgagaattagcttatgctttattt
gattccatctcaaaaaggcttggttatgcttcacgaagcaagtatctagaccaagtgatg
ggtccgattctttttcgatgggttgcttgcgagatgagtctagtttcacttgttgaggtg
caagaaatgtttggttatggttcggctgagccaaagaactttgttgaacattgtagctta
tggcttctgcctttccttattctcaggggtgatgctgctgacctgaattggatatcgaag
attttatcgcaacctttgcccgtcattatcaagagatactttgttccaatcttcggattg
tccattgccgccagatgtggtacagggccagagaaggacttagcggaaactgccttgtgt
gaatcacttttgcagctcggtgaaatttctgagcttgagcgtgacgatctcatcaaaaaa
catatggtttcaattgttgcccttttgctctcggtttcatcatcttctcatgggtcacaa
atcccatatttctccaaggaggttgttgcactttcggtgaaaacggtcgttgatggattt
gtggataccatggacgatgatttggctcacacagttgttattgataaaattaatatcttc
cgtgctgacagagtatttaagttcctacttgcaatacaccagcaagttgcagatgcttgc
catcccaggcacatgggtaaccggctttgtgcaattgaagttttgatagatgtacttgga
cacagagtggttcgtgagagcacttgcttctatattatttgtatagtggggaactacatc
cagcaaaaaccattgcaaggtcaatgctgtaatattttgtcgaaattgttggcttatttt
gatggaaattcctctgccgaaactgtggaagtgcttggcaggcagcttcaggttttagtt
ccaaaattgatcactgcttgcctaactaatgaaaaagaagaaagaagtggtattgcagat
tcatcaagggttctttctttacttcggcagttgacagtggatgctgatcctatgctttat
gattacataagagagttggaaccacttccttgtcttgattgcttgaaagatatacgagag
tttcacacttcactttctgcctcctatgcttcaagagatcagttcttaaagtttgttaat
agggctcctcatttgccaccggaactgttcttgttgagtcttcgtatgtatcacaacaag
ttattgttgggagaaatcatcagtagaagcgatctatctgctgctgatacggacatagtt
aactgctggtgcagtgacccagatgtagtttctgctgtatggactcttgttgacatttgt
agctcatctcctgtagcaaatgaagcttctccggtggttgctgattttatctccagggct
ggcttatctgatgcacatcaagtaatattccatctgccaacccttattcgaaagcatcct
gtagaactacatagtggttctgcttccaaggatgataaattgtgctcagactatggtatt
tctgatgatattttggttgagcttctgaaacttttgaagacttatttatctgatgaatct
gtagagataatagatgccgcttcacaaacattgaggggtgttctgtcaacaacaaagggg
ctcaatgctcttcagagccttgattctcttgataggtctttactgatggttcactctaga
ggtgtaaacacccagatagttgaacagattatattgggcatggaaaagtattctggtgtt
tcacttgaagattcagacatgtggcaaactgatggtcgaacttacgagcaatggttgtgc
accctagtgagctcactcatttgccattgtgatgacatcatcttgagactttgtaggagt
cttgcttttctcaaagttaaggctgctgagcttttgtttgcaagcactctcttgaacatc
gctggcaatgttgattctaatgctgccatctgcagattaatttcaaccaaggttgagaaa
ataattttttctgactccaatcattcactgaagtcaatccatctgtttttggatgcactt
aatgtcattagatccttttatgttgctgaaaaagccagaagttgcccttctaatactttc
caggatggtagatccgttagatcaaaaagtcgatcaccggcaacaactgcatcatcgtcg
tggaagaaggtgtactggctttcagttgattatcttgttgcggccagagctgctagtaga
tgctcatgtgacttcactgcactaatgtatgttgaactatggtgtgaggaacaattcaac
aggctggcaataggacctccagatttttcacatgaagagtcgctgccaccacatgttggt
ctgttggttgctgcatttactcgcataaatgaacctgatagcatttatgggatcacacta
gccaatgagataacatctcagatcatcagatacgagcatgaaggtgattggagtagtgct
cttgaatattatgatttactcgtaaggtcaacaccaaaggagcaccttggaaatttaaca
ggttcagtgttgactggatcatctgcttctagagcagaagataagatgctgaactgcaaa
atgcacaaaggtctgatgagatcattgcagaaaactggatgtagtcatgtgcttgatgtc
tactgtgaaggtttgacgcacctaaaagggtctcttcaacaagatgcagagtttattgat
atacaatatgaagctgcttggagggcaggaaactgggatttctcttttttcattccatat
tcatctcgttcttcaacccgcacccaaagttattgccttttcaatgaaaacttacacagt
tgcttaagatctctggagaatggtgattctgaggagttccatgcgaaactttgtcaagct
aagatggatcttgtgttggctttgtcaagtactagcatggaaagcacaaaatacatacat
tctaccatccttaagttacagatgcttgatcatgttaccatggtttgggacctgcgttgg
agcctttgtcacaatcaaacatcagaatctttaccaggaaccaagaaattttctcctgtt
tccactatccctactgggatgcagttggagctgctggataaagagtggaacttcatcgtg
ttccaaacagaacataaccttgatctttttgaacctttcctagcattcaggcgtgccctc
cttaaggttttaggttgtgaagaacatctcgtaactcatttatttcaatccgcttctgca
ctccgaaagggattaaggttttctttggcagcagctgctttatatgaactgaaagaacat
tgttttcaccaagatgggggcatcatgccaaatacttatttcctttcaaggcttgaagag
gctaaactgctgagagcacaagggcagcatgatatggcaattagtcttggtaaatacata
ctacagaagcattctgacaagaaagacgtatcagatgtctatcgactagtcggcaagtgg
ttggctgaaacaagatcgagcaactccggaactatcattgaggattatttaagaccttcc
atggatcttactgaatttaagaagagcacagacaaaaggtacatgtccaggcagtgtcga
acacatttccatatggcacattatacatatagtttattcaaaagctacgaggaaagactt
tcatctaatgagtggcaagcagctctgcgactaaggaaatacaagactagggagttggag
acactgattaaaagactgaaaagttcatctaagggtgtaaagactgattactcagtaaaa
atccaagagttacggaaacaacttgcactagacagagaagaagcacagaagattcaggat
gaccgggacaatttcttaaatctagcacttcaagggtaccaacgttcccttgttgttggt
ggcaaatatgacctacaagtggttttccggctggtctcactgtggtttagtcttttctca
agggatcaagttgtgaaagcaatgatgaaaacaacaaaagaggtccaatcctacaaattc
ataccattggtttaccaaattgcttcgagactcggaagctctaatactcagggctcatca
aacttccagattgccttagcttcacttttgaagaaaatggctctcgatcacccatatcat
acaatatttcagcttttggctctggcaaatggtgatcgtgttaaagacaagcaaaggagt
agaagttcttttgttgtagatatggaaaagaagcttgctgctgaaaatctgttaaaggag
ctatcttcctgtcatggagctttgatttgtcagatgaaacaaatggttgagatctacatt
aagttggctgaactggagaccaagaaggaggacactaacaaaagaattccgctgcccagg
gaggtccggagcatttctcagcttgaacttgttcccgttgtgactgctacagttccagtt
gaccctagttgtcagtatgaagtaggttcctttccacattttagtgggttggctgactct
attatgataatgaatggaattaatgctcccaaagttatagaatgttttggctcagatggt
aacaaataccgccaacttgcaaaatctggaaatgatgacctgcgacaggatgctgtgatg
gagcaatttttcagtttggtaaatactttcttgcaaaatcacagagatacttctcaaagg
agattgagaatccgtacatacaaggttgttccttttaccccaagtgctggtgttgttgaa
tgggtaaatggcactgttccactcggcgaatatctattggggagtactagaatcagtgga
gcacatggacgatatggaactggggactggacgtatcttcaatgcagagagtatttaatg
agtgaaaaggacaaaaggagggcatttcttaaaatatgcaataactttaggcctgtaatg
caccacttctttctcgagaaattcttgctgcctgctgattggttccaaagtagacttgct
tacacaagaagtgtggcagcaagctcaatggtaggatacatcgtgggacttggggatcgc
cattccatgaatattctaattgaccaagacacagctgaggttgtacacattgatcttggt
gttgcatttgaacaaggtctcatgcttaagacacctgaacgggttccatttcggctgaca
agggacattatagatggcatgggtgttactggtgttgaaggtgtgtttagaagatgttgt
gagaaaactctgtctgtcatgagggcaaataaagaagcattgctcacgatcatcgaagtt
ttcgttcatgatcctctatataaatgggcactctcaccactgaaagctttacagcgtcaa
aaggaaatagaagatactgactcgtgtttggatgactctcaagaagcttatgagggcaac
aaggatgcagctcgtgctatactccgtgttaaacagaagttggatgggtacgaagacggt
gagatgagaagtgtgcagggccaggtccaacaactcatacaggatgcggtagatgttgat
cgattgtgccaaatgtttcctggttggggaccttggttgtaa

DBGET integrated database retrieval system