Setaria viridis (green foxtail): 117857356
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Entry
117857356 CDS
T07951
Name
(RefSeq) trafficking protein particle complex subunit 12
KO
K20309
trafficking protein particle complex subunit 12
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
svs04131
]
117857356
Membrane trafficking [BR:
svs04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
117857356
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Gene cluster
GFIT
Motif
Pfam:
TPR_19
TPR_2
TPR_16
TPR_14
TPR_17
TPR_8
TPR_1
TPR_9
TPR_12
Motif
Other DBs
NCBI-GeneID:
117857356
NCBI-ProteinID:
XP_034595878
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All DBs
Position
1:complement(27049045..27052049)
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AA seq
330 aa
AA seq
DB search
MAAASSPTSPPPPPETDAAAPGLPDLSIPYDLATRGQWQALFSHLSHPAHVPHPHHRLLL
SALSALSLAKLRRFPDAAALLASLHPDPACPPPPFLIRLLHALLPLFLPDRPLALDRLYT
LLSSVRARPDAGHPEWRRRDALVASLLAADHLAHREFDVALALLADIAARDPGDPVLLSR
LAYAHLQIGNLAAASAAFRHVESVVAAAEDPARHANLLARNRALECIVAKDFAAAVREYE
RCIEADPADAVALNNKALCLMYSRDLGDAIKVLEGALERIPTAALNETVVVNLCSMYELA
FVNHGEVKRSLAEWIARVAPDDFDTSCTRM
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgcctcctcacccacctccccgcccccgccgccggagaccgacgccgccgcg
ccaggactccccgatctctcgataccctacgacctggccacgcgcgggcagtggcaggcg
ctcttctcccacctctcccacccggcccacgtcccgcacccgcaccaccgcctcctcctc
tccgcgctctccgccctctccctcgccaagctccgacgcttccccgacgccgccgcgctg
ctcgcctccctccacccggacccggcctgcccgccgccgcccttcctcatccgcctcctc
cacgcgctcctcccgctcttcctccccgaccgccccctcgcgctcgaccgcctctacacc
ctcctctcctccgtccgcgcccgccccgacgccgggcaccccgagtggcgccgccgcgac
gccctcgtcgcgtccctcctcgccgccgaccacctcgcccaccgcgagttcgacgtcgcc
ctagccctcctcgccgacatcgccgcgcgcgacccgggcgacccggtgctcctctcccgc
ctcgcctacgcgcacctccagatcggcaacctcgccgcggcctccgccgccttccgccac
gtggagtccgtggtcgccgcggccgaggaccccgcgcggcacgccaacctcctcgcccgc
aaccgcgctctggagtgcatcgtggccaaggacttcgcggcggcggtgcgggagtacgag
cgctgcatcgaagcggaccccgcagacgccgtggcgctcaacaacaaggcgctctgcctc
atgtactcgcgggacctcggcgacgccatcaaggtgctcgagggcgcgctcgagaggatt
cccacggcggccctcaacgagacggtggtggtcaacctgtgcagcatgtacgagctcgcc
tttgtcaaccatggcgaggtcaagaggagccttgccgaatggatcgccagggttgcgccc
gacgattttgacacctcctgcacgcggatgtag
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