KEGG   Setaria viridis (green foxtail): 117857357
Entry
117857357         CDS       T07951                                 
Name
(RefSeq) RNA-binding protein P
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
svs  Setaria viridis (green foxtail)
Pathway
svs03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:svs00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    117857357
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:svs03019]
    117857357
   03041 Spliceosome [BR:svs03041]
    117857357
Messenger RNA biogenesis [BR:svs03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     117857357
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     117857357
Spliceosome [BR:svs03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    117857357
SSDB
Motif
Pfam: RRM_1 RRM_7 Nop14 DNA_pol_phi
Other DBs
NCBI-GeneID: 117857357
NCBI-ProteinID: XP_034595875
LinkDB
Position
5:3915249..3917949
AA seq 465 aa
MGKKRKLETKPAAAAKASPATAAKSTTARAAGLSEVIAPVAAVKEEPQMAGGEEEEEEEE
VEVEEEVEVEEEVEVEEEEEEEDEEEAGEGESDPASIQALLDSFPKDQLVELLRDAAVAH
RDVRSAVRRVADADPAQRKIFVHGLGWDATADTLTEAFTPYGEIEDLRVVTDRNTGKCKG
YGFILFRHRSGARAALREPQKKIGNRNTACQLASVGPVPAGGAVSNPVPAPAQLQLPPVS
EYTQRKIFVSNVGADIDPQKLFLFFARYGEIEEGPLGLDKVTGKPKGFALFVYKTIESAK
KALEEPHKHFEGVVLHCQKAIDGPKSNKIGGHGGFYGAGASSGSKGVAGYGATSHSLPGS
VGIGQPMSPLAPSLASMPGGIAAAPGVDPALGQALTALLASQGAGLNLNSILGVGANGGV
PPQGASGALGGSGLPGMQGGYLGGYGGSGGYGSAPGGPGRNYMGH
NT seq 1398 nt   +upstreamnt  +downstreamnt
atgggcaagaagcggaagctcgagaccaaacccgcggcagccgctaaggcttccccggcc
accgcggccaagtccaccaccgctagggccgccggcctatccgaggtcatcgcccccgtc
gcggcggtgaaggaggagccccagatggcgggcggcgaggaggaggaagaggaggaggaa
gtggaggtcgaggaggaggtggaggtcgaggaggaagtagaggtcgaggaggaggaggag
gaggaggacgaagaagaggcgggcgaaggcgagagtgacccggcctcgatccaggcgctg
ctggattccttccccaaggaccagctcgtcgagctgctccgcgacgcggccgtcgcgcac
cgcgacgtgcgaagcgccgtccggcgcgtggccgatgccgacccggctcagcggaagatc
ttcgtccacggcctcggctgggacgccaccgccgacaccctcaccgaggcgttcaccccc
tacggcgagatcgaggacctcagggtcgtcaccgaccgcaacaccggcaagtgcaagggg
tacgggttcatcctcttccgccaccgctcgggcgcccgtgctgcgctccgcgagccccag
aagaagattgggaaccgcaacactgcctgccagctcgcctctgtgggccctgtcccggct
ggaggtgcggtcagcaaccctgtgccagccccagctcagttgcagctgccgcctgtgtca
gagtatacccagcgcaagatatttgtcagcaatgttggtgcagatatcgacccgcagaaa
ctgtttctattctttgcaaggtatggtgagattgaggagggtccgctgggtcttgacaag
gtcactgggaaacccaagggatttgctctttttgtctacaagaccattgagagtgccaag
aaggctcttgaggagccgcataagcatttcgagggagttgtgctgcactgccagaaggca
attgatggaccaaagtccaacaaaataggagggcatggaggcttttacggtgctggggct
tcaagtgggagcaagggggttgctggttatggagctactagtcattctctgcccggaagc
gttggtattggccagccgatgtcacctttggctcccagcttggcttcaatgccgggaggt
attgctgctgctccaggggtggatcctgctctggggcaggccttgacagctttgcttgcc
tcccagggggctgggctgaatttgaatagcattctgggagttggtgctaatggaggggtg
cctccgcagggggcatctggagcactgggtggtagcggtctgccagggatgcaaggtggt
tatttgggtggctatggtggttctggtgggtatgggagtgcaccaggggggcctggaaga
aattacatgggccattag

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