Setaria viridis (green foxtail): 117857369
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Entry
117857369 CDS
T07951
Name
(RefSeq) uncharacterized protein
KO
K03267
peptide chain release factor subunit 3
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
117857369
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
svs03019
]
117857369
03012 Translation factors [BR:
svs03012
]
117857369
Messenger RNA biogenesis [BR:
svs03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
117857369
Translation factors [BR:
svs03012
]
Eukaryotic type
Release factors
117857369
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
EF-G_D2
G-alpha
Dioxygenase_N
Motif
Other DBs
NCBI-GeneID:
117857369
NCBI-ProteinID:
XP_034595899
LinkDB
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Position
1:complement(19996863..20007195)
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AA seq
537 aa
AA seq
DB search
MEHDAEMAPPIASRASAAEAAADDWAARDDFEEKPAESHSPAPAAAAAEDDAGEAVSAPP
AQDVNGIQSSLQSLELQTSDDGVQMETEEEQNRKRHLNVVFIGHVDAGKSTAGGQILFLS
GQVDERTIQKYEKEAKDKSRESWYMAYIMDTNEEERAKGKTVEVGRAYFETEATRFTILD
APGHKSYVPNMISGASQADIGVLVISARKGEFETGYEKGGQTREHVLLAKTLGVSKLVVV
INKMDDPTVGWSKERYDEIEGRMIPFLKSSGYNVKKDVHFLPISGLLGTNMKTRMDKSIC
SWWNGPCLFEVLDCIEVPLRDPKGPVRVPIINKYKEMGTVVMGKIESGTIREGDNLLVMP
NKVNVKVLTIHCDEDKVRKAAPGENVRLKLSGIEEEDITPGFVLSSITNPVSAVSEFNAQ
LQILELLDNAIFTAGYKAVLHIHSVVEECEIVELIEEIDLKRKKETDPKKKKPKRKPLFV
KNGAVVVCCIQVNNLICIENFSDFPQLGRFTLRTEGKTVAVGKVVAVPPSGSSTFKA
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atggaacacgacgccgagatggcgccgccgatcgcctcccgcgcatccgccgccgaagct
gccgcggacgactgggcggcgcgcgacgatttcgaggagaagccagcggagtcccactct
ccggctccggcagctgcggccgccgaggacgatgctggagaggcggtctcagctcctccg
gcccaggatgtcaacggaattcagtcaagtcttcagtctctggagctgcagactagtgat
gacggggttcaaatggaaacagaggaggaacagaatagaaaacggcatttgaatgttgtg
tttatcggccatgttgatgcaggcaagtccacagctggaggtcagatattattcttaagt
ggacaagtggatgaacggacaatccagaaatatgagaaggaagcaaaggacaaaagcaga
gagagctggtacatggcatatattatggacacaaatgaggaagaacgggcaaagggcaag
actgttgaagttgggagagcttactttgagactgaagcaacaagattcacaattttggat
gcaccaggccacaaaagttacgttccaaacatgataagtggtgcatctcaagctgacatt
ggtgttctggtgatatctgctcggaaaggtgaatttgaaactgggtatgaaaaaggaggc
caaactcgtgaacatgtacttcttgcaaaaactttaggtgtttctaagttggtcgtggtc
ataaataagatggatgatcctactgttggatggtctaaagaaagatatgatgaaatagaa
ggcaggatgattcctttccttaagtcttcagggtacaatgtcaagaaagatgtccacttc
ttgccaatttctggtcttttgggaactaatatgaagactcgcatggataaaagcatttgt
agctggtggaatggtccatgcctttttgaagttcttgattgcattgaagtccctttacgg
gatcccaaaggcccagtaagggtgcccatcattaataaatataaagaaatgggcactgtg
gtgatgggaaaaatagagtcaggaactattagggagggcgataacttgttggtgatgccg
aacaaggtcaatgtgaaagtccttaccatacactgtgatgaggataaagtgagaaaagct
gcaccaggtgagaatgtccgtctcaagttgtcaggaattgaagaggaggacatcactcct
ggctttgtgctatcaagtataacaaatcctgtcagtgctgtatctgaatttaatgctcag
cttcagatactggagttgcttgacaatgcaattttcactgctggctacaaggcggtgttg
catatccactcagtagttgaggaatgtgagattgtagagcttatagaggaaattgatctg
aagaggaagaaagaaactgacccgaagaagaaaaagccaaagaggaagcctctttttgtg
aagaatggagctgttgttgtctgctgcatccaggtcaataacttgatatgcatcgagaac
ttctctgattttcctcagctcggaagatttacactccgaacagaaggtaaaacggtagct
gtaggaaaggttgttgctgttccgccaagtgggagttcaacgtttaaagcctaa
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