Setaria viridis (green foxtail): 117857377
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Entry
117857377 CDS
T07951
Name
(RefSeq) homeobox-leucine zipper protein HOX29 isoform X1
KO
K09338
homeobox-leucine zipper protein
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
svs03000
]
117857377
Transcription factors [BR:
svs03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain other
117857377
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
START
MEKHLA
Homeodomain
PDF2_C
ZPR
bZIP_1
KIP1
Homeobox_KN
DCT6_helical
HALZ
Motif
Other DBs
NCBI-GeneID:
117857377
NCBI-ProteinID:
XP_034595905
LinkDB
All DBs
Position
5:complement(11849174..11858155)
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AA seq
884 aa
AA seq
DB search
MVTAKEAAAAAMDASKYVRYTPEQVEALERLYYECPKPSSLRRQQLVRDCPVLANVDPKQ
IKVWFQNRRCREKQRKESSRLQALNRKLTAMNKLLMEENDRLQKQVSQLVYENGYYRQQT
QSVRAPLHSPIMPHHLLFPPTANQPTNPPLQAGLATTDTSCESVVTSGGQQNVAAAAAQP
QAQPRDASPAGLMSIAEETLTEFLSKATGTAVEWIQMPGMKPGPDSIGIIAISHGCAGVA
ARACGLVGMEPAKVAEILKDLPLWLRDCRSMEVVNVLPAGNNGTIELLYMQLYAPTTLAP
ARDFWLLRYTSILDDGSLVVCERSLSSKQGGPSMPLVQPFIRGEMLPSGFLIRPSDGGGS
IIHIVDHMNLEPWSVPEVVRPLYESSAMVAQKISMAALCYLRQVAHEDNHSVITGWGRQP
AALRALSQKLTRGFNEALNGLADDGWSVIESDGVDDVCISVNSSPSKVINCNATFNNGLP
IVSSSVLCAKASMLLQDVSPPALLRFMREQRSQWADSNLDAFFASAMKPNFCNLPMSRLG
GFGGQVILPLAHTFDPEEFLEVIKLGNASTYQDALMHRDLFLLQMYNGVDENTVGTCSEL
IFAPIDASFSDDSPLLPSGFRIIPIDSPLDTSSPNCTLDLASTLEVGTPRSRMPVGGSGN
AACAGSKAVMTIAFQFAFESHLQESVATMARQYMRSIIASVQRIALALSSSRLVPQVGVG
VGHAPAAAATASPEAATLSRWICQSYRFHFGAELIKSADAGGCEAGLKALWNHASAILCC
SLKAMPVFTFANQSGLDMLETTLVALQDITLEKVFDDQGRKNLCAELPGVMEQGFACIPG
GLCVSGLGRPVSYDKALAWKVLDDDSGAHCICFMFVNWSFVSSM
NT seq
2655 nt
NT seq
+upstream
nt +downstream
nt
atggtgacggcgaaggaggcggcggcggcggccatggacgcgagcaagtacgtgcggtac
acgccggagcaggtggaggcgctggagcggctctactacgagtgccccaagccgagctcg
ctgcgccgccagcagctcgtccgcgactgccccgtgctcgccaacgtcgaccccaagcag
atcaaagtctggttccagaaccgcaggtgccgggagaagcagcggaaggagtcgtcgcgg
ctgcaggcgctgaaccggaagctgacggccatgaacaagctgctcatggaggagaacgac
cgcctgcagaagcaggtctcgcagctcgtctacgagaacggctactaccgccagcagacg
cagagcgtacgtgcccctcttcactctccgattatgcctcaccacctcctcttcccaccc
actgcgaaccaaccaacaaaccctccgttgcaggcgggcttggcgacgacggacacgagc
tgcgagtcggtcgtcaccagcggcggccagcagaacgtcgcggcggcggcggcgcaaccg
caggctcagccgcgcgacgcgagccctgccgggttgatgtctatagcggaggagacattg
acggagtttctgtccaaggccaccgggaccgccgtcgagtggatccagatgcctgggatg
aagcctggtccggattccattggaatcattgccatctcgcatggttgcgcgggtgtcgcc
gcgcgagcttgcggcctcgtgggcatggagcctgcgaaagttgctgaaatcctcaaggat
ctaccgttgtggctacgcgattgccggtccatggaagtggtgaatgttctgcctgccggt
aacaatggcacgattgagcttctctacatgcagctctatgcccccacgacactggcacca
gctcgcgacttctggttgctgcggtacacctccattcttgatgacggaagtttagtggtg
tgtgaaaggtcgctcagtagcaagcaaggtggcccaagcatgcctcttgtccagcctttt
atcaggggtgagatgcttcctagtgggttcttgatccggcctagtgatggtggaggcagt
atcatacacatagttgatcatatgaacttagagccttggagtgtgcctgaagtagtgcgt
ccactttatgaatcctctgcaatggttgcccagaagatatctatggcggctttgtgctac
cttaggcaggttgcacatgaagataaccattctgtaataactggatggggacggcaacct
gctgctttacgggctctgagccaaaagctcaccagaggtttcaatgaagctctcaatggg
cttgctgatgatggatggtctgtgattgaaagcgatggagttgacgatgtttgtatctca
gttaactcatccccgagtaaagtgatcaactgcaatgcaactttcaataatggacttccc
atagtcagtagcagtgttctctgtgcaaaggcatcgatgctgctgcaggatgtttctccg
ccagcgctactacgttttatgagggaacagcggtcgcagtgggctgacagtaatttagat
gcattctttgcttccgcaatgaaacctaatttctgcaacttgcctatgtctcgccttgga
ggatttggtggtcaggtcatacttcctttagcccacacatttgaccctgaagaattcctg
gaagtcatcaaattaggaaatgccagtacctaccaggatgcactgatgcatcgcgatctg
ttcctgttgcagatgtacaatggtgtagacgagaacaccgtaggcacatgttcagagctc
atctttgcacccatagacgcatcattcagcgatgactccccactgctgccatccggtttc
cgcatcatccccatcgactctcctcttgacacatctagccccaactgcacgctggacctc
gcctccaccctcgaggtcgggacgccccggagcaggatgcccgtcggcggctccgggaac
gctgcatgcgccggctccaaggccgtcatgacgatcgcgttccagttcgcgttcgagagc
cacctgcaagagagcgtggcgaccatggcgaggcagtacatgcgcagcatcatcgcgtcg
gttcagaggatcgcgctggcgctctcgtcctcgcgcctcgtcccccaggtcggcgtcggc
gtcggccacgcccctgccgccgccgcgacggctagtccggaggcggccacgctctccaga
tggatttgccagagttacagatttcattttggggctgagctgatcaaatctgctgacgcc
ggtggctgtgaagctgggctaaaagccctttggaatcatgccagtgctatactctgctgc
tcgttaaaggccatgccggtgttcacgttcgcgaaccagtcggggctcgacatgctggag
acgacgctggtggcgctgcaagacatcaccctggagaaggtgttcgacgaccaggggagg
aagaacctgtgcgcggagctccccggcgtgatggagcaggggttcgcgtgcatccccggc
gggctgtgcgtgtcgggcctcggccggcctgtgtcgtacgacaaggcgctggcgtggaag
gtgctcgacgacgacagcggcgcgcactgcatctgcttcatgttcgtcaactggtccttc
gtctcgtccatgtaa
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