KEGG   Setaria viridis (green foxtail): 117857384
Entry
117857384         CDS       T07951                                 
Name
(RefSeq) ubiquitin-ribosomal protein eS31z fusion protein
  KO
K02977  ubiquitin-small subunit ribosomal protein S27Ae
Organism
svs  Setaria viridis (green foxtail)
Pathway
svs03010  Ribosome
svs04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:svs00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    117857384
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    117857384
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:svs03011]
    117857384
   04121 Ubiquitin system [BR:svs04121]
    117857384
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:svs04147]
    117857384
Ribosome [BR:svs03011]
 Ribosomal proteins
  Eukaryotes
   Small subunit
    117857384
  Archaea
    117857384
Ubiquitin system [BR:svs04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   117857384
Exosome [BR:svs04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   117857384
  Exosomal proteins of colorectal cancer cells
   117857384
SSDB
Motif
Pfam: ubiquitin Ribosomal_S27 Rad60-SLD Ubiquitin_2 Rad60-SLD_2 Dsc3_N Plexin_RBD Thioredox_PDIA6_C DUF2604 UBL_UBAC1 TBK1_ULD Fer2_3 Ubiquitin_5 Ogr_Delta OTU1_UBXL
Other DBs
NCBI-GeneID: 117857384
NCBI-ProteinID: XP_034595914
LinkDB
Position
5:complement(13605030..13605841)
AA seq 155 aa
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKHKKVKLAVLQFYKVDDATGKVTRLRK
ECPNAECGAGTFMANHFDRHYCGKCGLTYVYNQQA
NT seq 468 nt   +upstreamnt  +downstreamnt
atgcagatcttcgtgaagaccctgacggggaagaccatcacactggaggtggagtcctcg
gacaccatcgacaacgtgaaggccaagatccaggacaaggagggcatcccgccggaccag
cagcgcctcatcttcgccggcaagcagctcgaggatggccgcacgctcgccgactacaac
atccagaaggagtcgacgctgcacctggtgctccgcctcaggggaggggccaagaagcgc
aagaagaagacgtacaccaagcccaagaagatcaagcacaagcacaagaaggtgaagctc
gccgtgctccagttctacaaggtcgacgacgccaccggcaaggttacccgcctccgcaag
gaatgccccaacgccgagtgcggcgcgggaaccttcatggccaaccacttcgaccgccac
tactgcggtaagtgcggcctcacctacgtctacaaccagcaggcgtag

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