KEGG   Setaria viridis (green foxtail): 117857400
Entry
117857400         CDS       T07951                                 
Name
(RefSeq) uncharacterized protein
  KO
K24739  WD repeat-containing protein 13
Organism
svs  Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:svs00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:svs04990]
    117857400
Domain-containing proteins not elsewhere classified [BR:svs04990]
 Other domain-containing proteins
  WD40 repeat (WDR) domain-containing proteins
   117857400
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_THOC3 Beta-prop_WDR3_1st WD40_Prp19 Beta-prop_EML_2 WD40 WD40_CDC20-Fz WD40_WDHD1_1st WDR55 Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR3_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_1st Beta-prop_TEP1_2nd Beta-prop_RIG_2nd Beta-prop_WDR90_POC16_2nd EIF3I ANAPC4_WD40 Beta-prop_Aladin WD40_MABP1-WDR62_2nd Beta-prop_IFT140_1st Beta-prop_EML WDR90_beta-prop_4th NBCH_WD40 Beta-prop_ACSF4 Beta-prop_HPS5 Beta-prop_WDR35_TULP_N WD40_Gbeta Beta-prop_WDR75_1st Beta-prop_Vps41 Beta-prop_SCAP WD40_RFWD3 Beta-prop_WDR19_1st Beta-prop_IFT122_1st Beta-prop_DCAF12 Beta-prop_VPS8 Beta-prop_TEP1_C WD40_like Beta-prop_RIG_1st KNTC1_N Beta-prop_WDR41 Beta-prop_SPT8 Beta-prop_Nup120_160 PQQ_2 DUF1582 CPSF_A
Other DBs
NCBI-GeneID: 117857400
NCBI-ProteinID: XP_034595939
LinkDB
Position
5:complement(37761470..37765472)
AA seq 485 aa
MAAADSASASASASASCGIATSSPERPAAPSMPTDPDFLSCVLQPPTPSSSRPDADYAAL
RRLLLRRKPPSALQHRMDWRCNGKGYVAYRNFLLRRIDGGSAHSTPSSSGRWAPSPGPAL
SEADSWGSIRDLRTNSGLSRTVSISSKQSDTERHVRFAEPAYSFVGMHCIFDSCKTSVTV
LKFGRASSDLLAYGAADGSLTVCQVSEPPSVLQKLIGHSKNITDFDFSSNNQYIASCSLD
KTVRVWEISKGTCIRVVYGVSSQLCICFHPVNNNLLLVGNANKEINAINFSTGRVISKLN
FDDAVTALDIDHTGQLIFAGDAQGYIYTVSVNSHTGSLSRTHKNKSSRSKSPISTIQYRT
FSLVARCPVLLSCAQDGNLSFFSIATDAKGYLTLICSLKLASRVQTIRASFCPLLSLEKG
EFIVTGSEDANVYFYDLARPKNSCVNKLQGHGSPVIGVAWSHGENLLASSDSDGTVIVWK
RAKNN
NT seq 1458 nt   +upstreamnt  +downstreamnt
atggccgccgcggactccgcctccgcttccgcctccgcttccgcctcctgcggcatcgcc
acctcctccccggagcgccccgccgccccctccatgccgacggacccggacttcctcagc
tgcgtcctccagcccccgacgccctcctcctcccgccccgacgccgactacgccgccctc
cgccgcctgctcctccgccgcaagccgccctccgccctccagcaccgcatggactggcgg
tgcaacggcaagggctacgtcgcctaccgcaacttcctcctccgccgcatcgatggcggc
agcgcccacagcacgcccagcagcagtggaaggtgggctccttctcctggccctgcactc
tccgaggcagacagctggggctctatccgggacttgagaactaacagtgggctaagccgc
actgtaagtatcagctcaaagcaaagtgatacggagcgccatgtcagattcgctgagccc
gcatactcatttgttggaatgcattgcatttttgacagctgcaaaacctcagttacggta
ttgaaatttggccgggcaagttctgatctgcttgcgtatggtgcggcagatggcagtctg
acagtctgccaggtttctgagccaccatctgttcttcaaaaattgataggacactctaaa
aatatcacagattttgatttttcctctaataaccagtacatagcttcatgctccctggat
aaaactgtgcgagtatgggaaatctctaaaggcacatgcattagggttgtatatggagtt
tcttcccagctctgcatttgctttcatcctgtaaacaataatttgcttctagttggcaat
gcaaacaaggaaatcaatgcaataaattttagcactgggagagtaatcagcaaacttaac
tttgatgatgcggttacagctttggatattgatcacactgggcagcttattttcgctggt
gatgcacagggttacatatatactgttagtgtgaactcacatacagggtcactatctaga
actcacaagaacaagagcagtaggagcaaatctcctatttcaaccatccagtatcgcacc
ttttctctggtagcacgttgccctgtacttctttcttgcgctcaagatggaaacctatct
ttcttcagcatcgcaacagatgctaagggatacttgactctcatatgctctttaaaactg
gcctcgcgggtgcagactattcgtgcttccttctgtccgcttctttctcttgagaaagga
gagttcatagttactggtagcgaagatgcaaatgtttacttctatgatttggcacgacca
aagaactcgtgtgtgaataaactgcagggacatggttctccagtaattggagttgcctgg
agccatggggagaatttgcttgcctcctctgattcagatggtacagttattgtatggaag
cgggcgaaaaataattag

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