Setaria viridis (green foxtail): 117857400
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Entry
117857400 CDS
T07951
Name
(RefSeq) uncharacterized protein
KO
K24739
WD repeat-containing protein 13
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
svs04990
]
117857400
Domain-containing proteins not elsewhere classified [BR:
svs04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
117857400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40_Prp19
Beta-prop_EML_2
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
WDR55
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR3_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_1st
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
EIF3I
ANAPC4_WD40
Beta-prop_Aladin
WD40_MABP1-WDR62_2nd
Beta-prop_IFT140_1st
Beta-prop_EML
WDR90_beta-prop_4th
NBCH_WD40
Beta-prop_ACSF4
Beta-prop_HPS5
Beta-prop_WDR35_TULP_N
WD40_Gbeta
Beta-prop_WDR75_1st
Beta-prop_Vps41
Beta-prop_SCAP
WD40_RFWD3
Beta-prop_WDR19_1st
Beta-prop_IFT122_1st
Beta-prop_DCAF12
Beta-prop_VPS8
Beta-prop_TEP1_C
WD40_like
Beta-prop_RIG_1st
KNTC1_N
Beta-prop_WDR41
Beta-prop_SPT8
Beta-prop_Nup120_160
PQQ_2
DUF1582
CPSF_A
Motif
Other DBs
NCBI-GeneID:
117857400
NCBI-ProteinID:
XP_034595939
LinkDB
All DBs
Position
5:complement(37761470..37765472)
Genome browser
AA seq
485 aa
AA seq
DB search
MAAADSASASASASASCGIATSSPERPAAPSMPTDPDFLSCVLQPPTPSSSRPDADYAAL
RRLLLRRKPPSALQHRMDWRCNGKGYVAYRNFLLRRIDGGSAHSTPSSSGRWAPSPGPAL
SEADSWGSIRDLRTNSGLSRTVSISSKQSDTERHVRFAEPAYSFVGMHCIFDSCKTSVTV
LKFGRASSDLLAYGAADGSLTVCQVSEPPSVLQKLIGHSKNITDFDFSSNNQYIASCSLD
KTVRVWEISKGTCIRVVYGVSSQLCICFHPVNNNLLLVGNANKEINAINFSTGRVISKLN
FDDAVTALDIDHTGQLIFAGDAQGYIYTVSVNSHTGSLSRTHKNKSSRSKSPISTIQYRT
FSLVARCPVLLSCAQDGNLSFFSIATDAKGYLTLICSLKLASRVQTIRASFCPLLSLEKG
EFIVTGSEDANVYFYDLARPKNSCVNKLQGHGSPVIGVAWSHGENLLASSDSDGTVIVWK
RAKNN
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgcggactccgcctccgcttccgcctccgcttccgcctcctgcggcatcgcc
acctcctccccggagcgccccgccgccccctccatgccgacggacccggacttcctcagc
tgcgtcctccagcccccgacgccctcctcctcccgccccgacgccgactacgccgccctc
cgccgcctgctcctccgccgcaagccgccctccgccctccagcaccgcatggactggcgg
tgcaacggcaagggctacgtcgcctaccgcaacttcctcctccgccgcatcgatggcggc
agcgcccacagcacgcccagcagcagtggaaggtgggctccttctcctggccctgcactc
tccgaggcagacagctggggctctatccgggacttgagaactaacagtgggctaagccgc
actgtaagtatcagctcaaagcaaagtgatacggagcgccatgtcagattcgctgagccc
gcatactcatttgttggaatgcattgcatttttgacagctgcaaaacctcagttacggta
ttgaaatttggccgggcaagttctgatctgcttgcgtatggtgcggcagatggcagtctg
acagtctgccaggtttctgagccaccatctgttcttcaaaaattgataggacactctaaa
aatatcacagattttgatttttcctctaataaccagtacatagcttcatgctccctggat
aaaactgtgcgagtatgggaaatctctaaaggcacatgcattagggttgtatatggagtt
tcttcccagctctgcatttgctttcatcctgtaaacaataatttgcttctagttggcaat
gcaaacaaggaaatcaatgcaataaattttagcactgggagagtaatcagcaaacttaac
tttgatgatgcggttacagctttggatattgatcacactgggcagcttattttcgctggt
gatgcacagggttacatatatactgttagtgtgaactcacatacagggtcactatctaga
actcacaagaacaagagcagtaggagcaaatctcctatttcaaccatccagtatcgcacc
ttttctctggtagcacgttgccctgtacttctttcttgcgctcaagatggaaacctatct
ttcttcagcatcgcaacagatgctaagggatacttgactctcatatgctctttaaaactg
gcctcgcgggtgcagactattcgtgcttccttctgtccgcttctttctcttgagaaagga
gagttcatagttactggtagcgaagatgcaaatgtttacttctatgatttggcacgacca
aagaactcgtgtgtgaataaactgcagggacatggttctccagtaattggagttgcctgg
agccatggggagaatttgcttgcctcctctgattcagatggtacagttattgtatggaag
cgggcgaaaaataattag
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